title: ProPred: prediction of HLA-DR binding sites.
abstract: ProPred is a graphical web tool for predicting MHC class II binding regions in antigenic protein sequences. The server implement matrix based prediction algorithm, employing amino-acid/position coefficient table deduced from literature. The predicted binders can be visualized either as peaks in graphical interface or as colored residues in HTML interface. This server might be a useful tool in locating the promiscuous binding regions that can bind to several HLA-DR alleles.
  
  
  BACKGROUND
  The server is available at http://www.imtech.res.in/raghava/propred/
  
  
  BACKGROUND
  raghava@imtech.res.in
  
  
  BACKGROUND
  http://www.imtech.res.in/raghava/propred/page3.html
authors.affiliation: Bioinformatics Centre, Institute of Microbial Technology, Sector 39A, Chandigarh-160036, India.
authors.forename: H
authors.initials: H
authors.lastname: Singh
authors.forename: G P
authors.initials: GP
authors.lastname: Raghava
mesh_terms: D000465:Algorithms; D017951:Antigen Presentation / Q000276:immunology*; D001665:Binding Sites; D006684:HLA-DR Antigens / Q000276:immunology*; D006801:Humans; D010455:Peptides / Q000276:immunology*; D012984:Software
chemical_list: D006684:HLA-DR Antigens; D010455:Peptides