ProPred: prediction of HLA-DR binding sites.
ProPred is a graphical web tool for predicting MHC class II binding regions in antigenic protein sequences. The server implement matrix based prediction algorithm, employing amino-acid/position coefficient table deduced from literature. The predicted binders can be visualized either as peaks in graphical interface or as colored residues in HTML interface. This server might be a useful tool in locating the promiscuous binding regions that can bind to several HLA-DR alleles.


BACKGROUND
The server is available at http://www.imtech.res.in/raghava/propred/


BACKGROUND
raghava@imtech.res.in


BACKGROUND
http://www.imtech.res.in/raghava/propred/page3.html
Singh
H
H
Bioinformatics Centre, Institute of Microbial Technology, Sector 39A, Chandigarh-160036, India.
Raghava
G P
GP
D000465:Algorithms; D017951:Antigen Presentation / Q000276:immunology*; D001665:Binding Sites; D006684:HLA-DR Antigens / Q000276:immunology*; D006801:Humans; D010455:Peptides / Q000276:immunology*; D012984:Software
D006684:HLA-DR Antigens; D010455:Peptides