title: The EcoCyc Database.
abstract: EcoCyc is an organism-specific pathway/genome database that describes the metabolic and signal-transduction pathways of Escherichia coli, its enzymes, its transport proteins and its mechanisms of transcriptional control of gene expression. EcoCyc is queried using the Pathway Tools graphical user interface, which provides a wide variety of query operations and visualization tools. EcoCyc is available at http://ecocyc.org/.
authors.affiliation: Bioinformatics Research Group, SRI International, 333 Ravenswood Avenue EK207, Menlo Park, CA 94025, USA. pkarp@ai.sri.com
authors.forename: Peter D
authors.initials: PD
authors.lastname: Karp
authors.forename: Monica
authors.initials: M
authors.lastname: Riley
authors.forename: Milton
authors.initials: M
authors.lastname: Saier
authors.forename: Ian T
authors.initials: IT
authors.lastname: Paulsen
authors.forename: Julio
authors.initials: J
authors.lastname: Collado-Vides
authors.forename: Suzanne M
authors.initials: SM
authors.lastname: Paley
authors.forename: Alida
authors.initials: A
authors.lastname: Pellegrini-Toole
authors.forename: César
authors.initials: C
authors.lastname: Bonavides
authors.forename: Socorro
authors.initials: S
authors.lastname: Gama-Castro
mesh_terms: D003628:Database Management Systems; D030541:Databases, Genetic; D004926:Escherichia coli / Q000235:genetics* / Q000378:metabolism*; D029968:Escherichia coli Proteins / Q000235:genetics* / Q000502:physiology*; D015964:Gene Expression Regulation, Bacterial; D016680:Genome, Bacterial; D016247:Information Storage and Retrieval; D020407:Internet; D021381:Protein Transport; D015398:Signal Transduction
chemical_list: D029968:Escherichia coli Proteins