title: Overcrowding motifs in large PAHs. An ab initio study.
abstract: Planar and overcrowded LPAHs C(34)H(18) anthra[9,1,2-cde]benzo[rst]penaphene (1), benzo[rst]phenanthro[10,1,2-cde]pentaphene (2), tetrabenzo[a,cd,j,lm]perylene (3), tetrabenzo[a,cd,lm,o]perylene (4), and LPAHs C(38)H(18) anthra[2,1,9,8-klmno]naphtho[3,2,1,8,7-vwxyz]hexaphene (5), dianthra[2,1,9,8-stuva;2',1',9',8'-hijkl]pentacene (6), dibenzo[jk,uv]dinaphtho[2,1,8,7-defg;2',1',8',7'-opqr]perylene (7), diphenanthro[5,4,3-abcd;3',4',5'-lmno]perylene (8), potential products of peri-peri reductive couplings of benzanthrone and of naphthanthrone, respectively, were subjected to an ab initio study with emphasis on overcrowding motifs. The HF and DFT B3LYP methods were employed to calculate energies and geometries of the minima conformations of these LPAHs. The most stable LPAHs in these series were found to be planar C(2)(v)()-1 and C(2)(v)()-5, respectively. Among overcrowded LPAHs, twisted-folded C(2)-3 and C(2)-7 with two cove regions were found to be more stable than their respective isomers twisted-folded C(2)-4 and C(2)-8 with one fjord region each, in contrast to the semiempirical predictions. The energy differences between the most stable planar isomer and the overcrowded isomers were significantly smaller in the C(38)H(18) series, than in the C(34)H(18) series. Overcrowded twisted-folded C(2)-7 with two coves was found to be more stable than planar C(2)(h)()-6 by 2.0 kJ/mol (at B3LYP/6-311G), indicating enhanced role of aromatic stabilization and decreased destabilization due to overcrowding, with increasing the number of aromatic rings. Heats of formation of LPAHs 1-8 were derived from the ab initio total energies (at B3LYP/6-31G). A search of the conformational spaces of 3 and 4 revealed an anti-folded local minimum C(i)()-3 and a syn-folded transition state C(s)()-4, 23.7 and 120.3 kJ/mol higher in energy than the twisted-folded C(2)-3 and C(2)-4, respectively (at B3LYP/6-31G). The cove and fjord torsion angles in the C(38)H(18) series were found to be smaller than in the C(34)H(18) series. The nonbonding distances between carbon atoms at cove and fjord regions of the overcrowded LPAHs were found to be smaller than the sum of the van der Waals radii of two carbon atoms
authors.affiliation: Department of Organic Chemistry, The Hebrew University of Jerusalem, Jerusalem 91904, Israel.
authors.forename: Sergey
authors.initials: S
authors.lastname: Pogodin
authors.forename: Israel
authors.initials: I
authors.lastname: Agranat
mesh_terms: D004355:Drug Stability; D008958:Models, Molecular; D008968:Molecular Conformation; D011084:Polycyclic Aromatic Hydrocarbons / Q000737:chemistry*; D013816:Thermodynamics
chemical_list: D011084:Polycyclic Aromatic Hydrocarbons