Bayesian analysis of liability of clinical mastitis in Norwegian cattle with a threshold model: effects of data sampling method and model specification.
First-lactation records of Norwegian Cattle were used to infer heritability of liability to clinical mastitis with a threshold sire model. Mastitis was defined as a binary response (presence or absence) in a defined period of first lactation (opportunity period). Length of opportunity period (from 30 d before calving up to 120 or 300 d of lactation) had less effect on heritability estimates than data sampling methods (include or exclude records of cows culled before the end of the opportunity period) whereas sire ranking was more affected by the former. Including all cows, whether culled before the end of the opportunity period or not, gave a sharper and more symmetric posterior distribution of heritability of liability to clinical mastitis. When we analyzed data for all cows, model specification had a small effect on heritability estimates, while sire ranking was affected markedly. Posterior means of heritability range from 0.058 to 0.074. A model regressing on the length of the opportunity period for culled cows without mastitis, was shown favorable for the two opportunity periods using Bayes factors and the deviance information criterion for model comparison. This model, in which liability of mastitis depends on time to culling, may allow utilizing information from all first lactations in genetic evaluation, irrespectively of duration and culling outcome.
Heringstad
B
B
Department of Animal Science, Agricultural University of Norway, As. bjorg.heringstad@ihf.nlh.no
Rekaya
R
R
Gianola
D
D
Klemetsdal
G
G
Weigel
K A
KA
D000818:Animals; D001499:Bayes Theorem; D001947:Breeding / Q000706:statistics & numerical data; D002417:Cattle / Q000235:genetics*; D005260:Female; D007774:Lactation; D008297:Male; D008414:Mastitis, Bovine / Q000453:epidemiology / Q000235:genetics*; D008957:Models, Genetic; D015233:Models, Statistical; D009664:Norway / Q000453:epidemiology; D010375:Pedigree; D015983:Selection Bias; D013997:Time Factors