title: Construction and in vitro characterization of a molecularly cloned human immunodeficiency virus type 1 library.
abstract: Development of a safe and effective vaccine against human immunodeficiency virus (HIV) is urgent, but many concerns regarding the safety and efficacy of the currently developing vaccines remain. A major hindrance in HIV vaccine development is the genetic diversity, a hallmark of HIV biology, and a poor understanding of how HIV vaccine prevents the emergence of escape variants during infection and progression of AIDS. Here, we developed a method to construct a molecularly cloned viral library. This technique employs a long-range polymerase chain reaction (PCR) to amplify a virtually full-length HIV type 1 (HIV-1) provirus genome from peripheral blood mononuclear cells (PBMCs) infected with CRF01_AE (subtype E) Thai primary isolate. Among randomly selected 93 clones, 41 with a full-length sequence were able to replicate in PBMCs, 5 of which induced strong cytopathic effects. Replication kinetics also showed that the parental virus was intermediate among the clones. Thus, the molecular library prepared by this method showed the quasi-species in infected cells and this method could provide a new possibility for the development of an order-made therapeutic vaccine against HIV-1.
authors.affiliation: Department of Virology, Research Institute for Microbial Diseases, Osaka University, Suita, 565-0871, Osaka, Japan. tmukai@nih.go.jp
authors.forename: Tetsu
authors.initials: T
authors.lastname: Mukai
authors.forename: Takeshi
authors.initials: T
authors.lastname: Kurosu
authors.forename: Masanobu
authors.initials: M
authors.lastname: Kinomoto
authors.forename: Satoshi
authors.initials: S
authors.lastname: Komoto
authors.forename: Miki
authors.initials: M
authors.lastname: Shiraga
authors.forename: Wattana
authors.initials: W
authors.lastname: Auwanit
authors.forename: Kazuyoshi
authors.initials: K
authors.lastname: Ikuta
mesh_terms: D016915:AIDS Vaccines; D015723:Gene Library; D016679:Genome, Viral; D015497:HIV-1 / Q000235:genetics*; D007963:Leukocytes, Mononuclear / Q000821:virology; D016133:Polymerase Chain Reaction; D014162:Transfection; D014779:Virus Replication
chemical_list: D016915:AIDS Vaccines