title: Genome sequence of the plant pathogen Ralstonia solanacearum.
abstract: Ralstonia solanacearum is a devastating, soil-borne plant pathogen with a global distribution and an unusually wide host range. It is a model system for the dissection of molecular determinants governing pathogenicity. We present here the complete genome sequence and its analysis of strain GMI1000. The 5.8-megabase (Mb) genome is organized into two replicons: a 3.7-Mb chromosome and a 2.1-Mb megaplasmid. Both replicons have a mosaic structure providing evidence for the acquisition of genes through horizontal gene transfer. Regions containing genetically mobile elements associated with the percentage of G+C bias may have an important function in genome evolution. The genome encodes many proteins potentially associated with a role in pathogenicity. In particular, many putative attachment factors were identified. The complete repertoire of type III secreted effector proteins can be studied. Over 40 candidates were identified. Comparison with other genomes suggests that bacterial plant pathogens and animal pathogens harbour distinct arrays of specialized type III-dependent effectors.
authors.affiliation: Genoscope and CNRS UMR-8030, 2 rue Gaston Crémieux, CP5706, 91057 Evry Cedex, France.
authors.forename: M
authors.initials: M
authors.lastname: Salanoubat
authors.forename: S
authors.initials: S
authors.lastname: Genin
authors.forename: F
authors.initials: F
authors.lastname: Artiguenave
authors.forename: J
authors.initials: J
authors.lastname: Gouzy
authors.forename: S
authors.initials: S
authors.lastname: Mangenot
authors.forename: M
authors.initials: M
authors.lastname: Arlat
authors.forename: A
authors.initials: A
authors.lastname: Billault
authors.forename: P
authors.initials: P
authors.lastname: Brottier
authors.forename: J C
authors.initials: JC
authors.lastname: Camus
authors.forename: L
authors.initials: L
authors.lastname: Cattolico
authors.forename: M
authors.initials: M
authors.lastname: Chandler
authors.forename: N
authors.initials: N
authors.lastname: Choisne
authors.forename: C
authors.initials: C
authors.lastname: Claudel-Renard
authors.forename: S
authors.initials: S
authors.lastname: Cunnac
authors.forename: N
authors.initials: N
authors.lastname: Demange
authors.forename: C
authors.initials: C
authors.lastname: Gaspin
authors.forename: M
authors.initials: M
authors.lastname: Lavie
authors.forename: A
authors.initials: A
authors.lastname: Moisan
authors.forename: C
authors.initials: C
authors.lastname: Robert
authors.forename: W
authors.initials: W
authors.lastname: Saurin
authors.forename: T
authors.initials: T
authors.lastname: Schiex
authors.forename: P
authors.initials: P
authors.lastname: Siguier
authors.forename: P
authors.initials: P
authors.lastname: Thébault
authors.forename: M
authors.initials: M
authors.lastname: Whalen
authors.forename: P
authors.initials: P
authors.lastname: Wincker
authors.forename: M
authors.initials: M
authors.lastname: Levy
authors.forename: J
authors.initials: J
authors.lastname: Weissenbach
authors.forename: C A
authors.initials: CA
authors.lastname: Boucher
mesh_terms: D001426:Bacterial Proteins / Q000378:metabolism; D005075:Biological Evolution; D016680:Genome, Bacterial; D023281:Genomics; D016946:Gram-Negative Aerobic Rods and Cocci / Q000235:genetics* / Q000472:pathogenicity; D018551:Solanum lycopersicum / Q000821:virology; D008969:Molecular Sequence Data; D017422:Sequence Analysis, DNA; D014774:Virulence / Q000235:genetics
chemical_list: D001426:Bacterial Proteins