title: Identification of environmental stress-regulated genes in Helicobacter pylori by a lacZ reporter gene fusion system.
abstract: BACKGROUND
  Helicobacter pylori persists in the human stomach for decades. This requires an efficient adaptation of H. pylori to the gastric niche and involves the regulation of bacterial genes in response to environmental stress. Efficient molecular tools to identify regulated H. pylori genes are scarce, therefore we developed a genomic lacZ reporter gene fusion system in H. pylori to screen for stress-regulated genes.
  
  
  METHODS
  The integration vector pBW was constructed and used to generate random genomic lacZ fusions in H. pylori. Two-hundred-and-fifty H. pylori transformants were selected from this library, replica-plated and screened for differential lacZ expression after exposure to two environmental stress conditions: increased temperature (42 degrees C), and iron-limitation.
  
  
  RESULTS
  From a library of H. pylori transformants with random genomic transcriptional lacZ fusions, two stress-regulated H. pylori loci were identified. The transcription of a gene of unknown function (designated hsp12) was increased by incubation at 42 degrees C. The transcription of a locus, consisting of the three fumarate reductase subunit genes (frdCAB) and the HP0190 gene from H. pylori strain 26695, was decreased under iron-limitation.
  
  
  CONCLUSIONS
  This is the first time that a genomic transcriptional lacZ reporter gene H. pylori library has been used as a tool for the fast and efficient identification of environmental stress-regulated H. pylori genes.
authors.affiliation: Department of Gastroenterology, Faculty of Medicine, Vrije Universiteit, Amsterdam, The Netherlands.
authors.forename: N
authors.initials: N
authors.lastname: de Vries
authors.forename: E J
authors.initials: EJ
authors.lastname: Kuipers
authors.forename: N E
authors.initials: NE
authors.lastname: Kramer
authors.forename: A H
authors.initials: AH
authors.lastname: van Vliet
authors.forename: J J
authors.initials: JJ
authors.lastname: Bijlsma
authors.forename: M
authors.initials: M
authors.lastname: Kist
authors.forename: S
authors.initials: S
authors.lastname: Bereswill
authors.forename: C M
authors.initials: CM
authors.lastname: Vandenbroucke-Grauls
authors.forename: J G
authors.initials: JG
authors.lastname: Kusters
mesh_terms: D001426:Bacterial Proteins / Q000235:genetics* / Q000378:metabolism; D005260:Female; D015964:Gene Expression Regulation, Bacterial; D017930:Genes, Reporter; D006360:Heat-Shock Proteins / Q000235:genetics* / Q000378:metabolism; D016480:Helicobacter pylori / Q000235:genetics / Q000254:growth & development*; D006801:Humans; D007501:Iron / Q000378:metabolism; D007763:Lac Operon / Q000235:genetics* / Q000502:physiology; D008969:Molecular Sequence Data; D011993:Recombinant Fusion Proteins / Q000235:genetics / Q000378:metabolism; D013696:Temperature; D014158:Transcription, Genetic
chemical_list: D001426:Bacterial Proteins; D006360:Heat-Shock Proteins; D011993:Recombinant Fusion Proteins; D007501:Iron