A formal method to resolve temporal mismatches in clinical databases.
Overcoming data heterogeneity is essential to the transfer of decision-support programs to legacy databases and to the integration of data in clinical repositories. Prior methods have focused primarily on problems of differences in terminology and patient identifiers, and have not addressed formally the problem of temporal data heterogeneity, even though time is a necessary element in storing, manipulating, and reasoning about clinical data. In this paper, we present a method to resolve temporal mismatches present in clinical databases. This method is based on a foundational model of time that can formalize various temporal representations. We use this temporal model to define a novel set of twelve operators that can map heterogeneous time-stamped data into a uniform temporal scheme. We present an algorithm that uses these mapping operators, and we discuss our implementation and evaluation of the method as a software program called Synchronus.
Das
A K
AK
Stanford Medical Informatics, Stanford University, Stanford, CA 94305, USA.
Musen
M A
MA
D000465:Algorithms; D019992:Databases as Topic / Q000458:organization & administration*; D020000:Decision Support Systems, Clinical; D012984:Software; D013995:Time