title: Use of the transposon Ac as a gene-searching engine in the maize genome.
abstract: We show here that, although genes constitute only a small percentage of the maize genome, it is possible to identify them phenotypically as Ac receptor sites. Simple and efficient Ac transposition assays based on the well-studied endosperm markers bz and wx were used to generate a collection of >1300 independent Ac transposants. The majority of transposed Ac elements are linked to either the bz or the wx donor loci on chromosome 9. A few of the insertions produce obvious visible phenotypes, but most of them do not, suggesting that these populations will be more useful for reverse genetics than for forward transposon mutagenesis. An inverse polymerase chain reaction method was adapted for the isolation of DNA adjacent to the transposed Ac elements (tac sites). Most Ac insertions were into unique DNA. By sequencing tac sites and comparing the sequences to existing databases, insertions were identified in a number of putative maize genes. The expression of most of these genes was confirmed by RNA gel blot analysis. We report here the isolation and characterization of the first 46 tac sites from the two insertion libraries.
authors.affiliation: Waksman Institute, Rutgers University, Piscataway, New Jersey 08855, USA.
authors.forename: Matthew
authors.initials: M
authors.lastname: Cowperthwaite
authors.forename: Wonkeun
authors.initials: W
authors.lastname: Park
authors.forename: Zhennan
authors.initials: Z
authors.lastname: Xu
authors.forename: Xianghe
authors.initials: X
authors.lastname: Yan
authors.forename: Steven C
authors.initials: SC
authors.lastname: Maurais
authors.forename: Hugo K
authors.initials: HK
authors.lastname: Dooner
mesh_terms: D019295:Computational Biology; D004251:DNA Transposable Elements; D018744:DNA, Plant / Q000737:chemistry / Q000187:drug effects; D015870:Gene Expression; D017343:Genes, Plant / Q000235:genetics*; D018745:Genome, Plant; D015698:Genomic Library; D008969:Molecular Sequence Data; D016254:Mutagenesis, Insertional; D017422:Sequence Analysis, DNA; D003313:Zea mays / Q000235:genetics*
chemical_list: D004251:DNA Transposable Elements; D018744:DNA, Plant