An automated annotation tool for genomic DNA sequences using GeneScan and BLAST.
Genomic sequence data are often available well before the annotated sequence is published. We present a method for analysis of genomic DNA to identify coding sequences using the GeneScan algorithm and characterize these resultant sequences by BLAST. The routines are used to develop a system for automated annotation of genome DNA sequences.
Lynn
A M
AM
Bioinformatics Centre, Jawaharlal Nehru University, New Delhi 110 067, India.
Jain
C K
CK
Kosalai
K
K
Barman
P
P
Thakur
N
N
Batra
H
H
Bhattacharya
A
A
D000465:Algorithms; D000818:Animals; D005057:Eukaryotic Cells; D019143:Evolution, Molecular; D005583:Fourier Analysis; D005827:Genetics, Microbial; D023281:Genomics; D010963:Plasmodium falciparum / Q000235:genetics; D017422:Sequence Analysis, DNA; D012984:Software