title: Biosynthesis of the dideoxysugar component of jadomycin B: genes in the jad cluster of Streptomyces venezuelae ISP5230 for L-digitoxose assembly and transfer to the angucycline aglycone.
abstract: Eight additional genes, jadX, O, P, Q, S, T, U and V, in the jad cluster of Streptomyces venezuelae ISP5230, were located immediately downstream of jadN by chromosome walking. Sequence analyses and comparisons implicated them in biosynthesis of the 2,6-dideoxysugar in jadomycin B. The genes were cloned in Escherichia coli, inactivated by inserting an apramycin resistance cassette with a promoter driving transcription of downstream genes, and transferred into Streptomyces venezuelae by intergeneric conjugation. Analysis by HPLC and NMR of intermediates accumulated by cultures of the insertionally inactivated Streptomyces venezuelae mutants indicated that jadO, P, Q, S, T, U and V mediate formation of the dideoxysugar moiety of jadomycin B and its attachment to the aglycone. Based on these results and sequence similarities to genes described in other species producing deoxysugar derivatives, a biosynthetic pathway is proposed in which the jadQ product (glucose-1-phosphate nucleotidyltransferase) activates glucose to its nucleotide diphosphate (NDP) derivative, and the jadT product (a 4,6-dehydratase) converts this to NDP-4-keto-6-deoxy-D-glucose. An NDP-hexose 2,3-dehydratase and an oxidoreductase, encoded by jadO and jadP, respectively, catalyse ensuing reactions that produce an NDP-2,6-dideoxy-D-threo-4-hexulose. The product of jadU (NDP-4-keto-2,6-dideoxy-5-epimerase) converts this intermediate to its L-erythro form and the jadV product (NDP-4-keto-2,6-dideoxyhexose 4-ketoreductase) reduces the keto group of the NDP-4-hexulose to give an activated form of the L-digitoxose moiety in jadomycin B. Finally, a glycosyltransferase encoded by jadS transfers the activated sugar to jadomycin aglycone. The function of jadX is unclear; the gene is not essential for jadomycin B biosynthesis, but its presence ensures complete conversion of the aglycone to the glycoside. The deduced amino acid sequence of a 612 bp ORF (jadR*) downstream of the dideoxysugar biosynthesis genes resembles many TetR-family transcriptional regulator sequences.
authors.affiliation: Department of Biology, Dalhousie University, Halifax, Nova Scotia, CanadaB3H 4J11.
authors.forename: Liru
authors.initials: L
authors.lastname: Wang
authors.affiliation: Department of Chemistry, Dalhousie University, Halifax, Nova Scotia, CanadaB3H 4J32.
authors.forename: Robert L
authors.initials: RL
authors.lastname: White
authors.affiliation: Department of Biology, Dalhousie University, Halifax, Nova Scotia, CanadaB3H 4J11.
authors.forename: Leo C
authors.initials: LC
authors.lastname: Vining
mesh_terms: D000595:Amino Acid Sequence; D000900:Anti-Bacterial Agents / Q000138:chemical synthesis*; D016386:Chromosome Walking; D015825:Chromosomes, Fungal / Q000235:genetics*; D003001:Cloning, Molecular; D003227:Conjugation, Genetic; D003837:Deoxy Sugars / Q000096:biosynthesis*; D004171:Diploidy; D004926:Escherichia coli / Q000235:genetics; D005816:Genetic Complementation Test; D005838:Genotype; D006601:Hexoses / Q000096:biosynthesis*; D007438:Introns; D007546:Isoquinolines / Q000378:metabolism*; D008969:Molecular Sequence Data; D005810:Multigene Family; D010641:Phenotype; D011401:Promoter Regions, Genetic; D015183:Restriction Mapping; D016415:Sequence Alignment; D017386:Sequence Homology, Amino Acid; D013302:Streptomyces / Q000235:genetics*
chemical_list: D000900:Anti-Bacterial Agents; D003837:Deoxy Sugars; D006601:Hexoses; D007546:Isoquinolines; C081750:jadomycin B; C020615:digitoxose