title: Distinct mutational drug resistance profiles of HIV-1 RNA in plasma and culture isolates of patients receiving antiretroviral therapy.
abstract: The differences in profiles of HIV mutational drug resistance between paired plasma samples and culture isolates were analyzed in treated and untreated HIV-infected patients. The DNA sequence of the entire protease gene and codons 1-320 of the reverse transcriptase gene was analyzed from the paired plasma samples and viral isolates. Differences in the distribution of resistance mutations from the two sources were detected in 13 of 14 patients receiving antiretroviral therapy. Some excess mutations, observed in plasma samples but not in culture isolates, are reportedly associated with resistance to antiretroviral drugs. These results emphasize the need for standardization and clinical laboratory use of phenotypic assays that avoid extensive cocultivation.
authors.affiliation: Department of Microbiology, University of Pavia School of Medicine and IRCCS Policlinico San Matteo, Pavia, Italy. mdeb@unipv.it
authors.forename: Marizia
authors.initials: M
authors.lastname: Debiaggi
authors.forename: Raffaele
authors.initials: R
authors.lastname: Bruno
authors.forename: Paolo
authors.initials: P
authors.lastname: Sacchi
authors.forename: Giorgio
authors.initials: G
authors.lastname: Achilli
authors.forename: Egidio
authors.initials: E
authors.lastname: Romero
authors.forename: Gaetano
authors.initials: G
authors.lastname: Filice
mesh_terms: D023241:Antiretroviral Therapy, Highly Active; D024882:Drug Resistance, Viral / Q000235:genetics*; D005838:Genotype; D015658:HIV Infections / Q000188:drug therapy* / Q000821:virology; D016333:HIV Protease / Q000235:genetics; D054303:HIV Reverse Transcriptase / Q000235:genetics; D015497:HIV-1 / Q000145:classification / Q000187:drug effects* / Q000235:genetics / Q000502:physiology; D006801:Humans; D007963:Leukocytes, Mononuclear / Q000821:virology; D009154:Mutation; D010641:Phenotype; D012367:RNA, Viral / Q000097:blood*
chemical_list: D012367:RNA, Viral; D054303:HIV Reverse Transcriptase; D016333:HIV Protease