title: Fluorescent inhibitors reveal solvent-dependent micropolarity in the lipid binding sites of lipases.
abstract: Triacylglycerol analogue p-nitrophenyl phosphonates specifically react with the active-site serine of lipolytic enzymes to give covalent lipase-inhibitor complexes, mimicking the first transition state which is involved in lipase-mediated ester hydrolysis. Here we report on a new type of phosphonate inhibitors containing a polarity-sensitive fluorophore to monitor micropolarity around the active site of the enzyme in different solvents. The respective compounds are hexyl and methyl dimethylamino-naphthalenecarbonylethylmercaptoethoxy-phosphonates. The hexyl phosphonate derivative was reacted with lipases from Rhizopus oryzae (ROL), Chromobacterium viscosum (CVL), and Pseudomonas cepacia (PCL). The resulting lipid-protein complexes were characterized in solution with respect to water penetration into the lipid binding site and the associated conformational changes of the proteins as a consequence of solvent polarity changes. We found that the accessibility of the lipid-binding site in all lipases studied was lowest in water. It was much higher when the protein was dissolved in aqueous ethanol. These biophysical effects may contribute to the previously observed dramatic changes of enzyme functions such as activity and stereoselectivity depending on the respective solvents.
authors: Department of Biochemistry, Technische Universität Graz, Petersgasse 12/II, A-8010 Graz, Austria.
authors: Olga V
authors: OV
authors: Oskolkova
authors: Albin
authors: A
authors: Hermetter
mesh_terms: D015081:2-Naphthylamine / Q000031:analogs & derivatives*; D001665:Binding Sites; D016956:Burkholderia cepacia / Q000201:enzymology; D004791:Enzyme Inhibitors / Q000494:pharmacology; D005456:Fluorescent Dyes; D008049:Lipase / Q000037:antagonists & inhibitors* / Q000737:chemistry; D008055:Lipids / Q000737:chemistry; D015394:Molecular Structure; D009281:Naphthalenes / Q000138:chemical synthesis / Q000494:pharmacology*; D009596:Nitrophenols; D063065:Organophosphonates / Q000138:chemical synthesis / Q000494:pharmacology*; D011487:Protein Conformation; D012233:Rhizopus / Q000201:enzymology; D012694:Serine / Q000737:chemistry; D012997:Solvents; D013050:Spectrometry, Fluorescence
chemical_list: D004791:Enzyme Inhibitors; D005456:Fluorescent Dyes; D008055:Lipids; D009281:Naphthalenes; D009596:Nitrophenols; D063065:Organophosphonates; D012997:Solvents; C464463:fluorescent phosphonate IVa; C464464:fluorescent phosphonate IVb; C085778:4-nitrophenyl phosphonate; D012694:Serine; C038518:acrylodan; D015081:2-Naphthylamine; D008049:Lipase; C454481:lipase, Chromobacterium viscosum