Cellophane based mini-prep method for DNA extraction from the filamentous fungus Trichoderma reesei.
BACKGROUND
Methods for the extraction of DNA from filamentous fungi are frequently laborious and time consuming because most of the available protocols include maceration in liquid nitrogen after the mycelium has been grown in a liquid culture. This paper describes a new method to replace those steps, which involves the growth of the mycelium on cellophane disks overlaid on solid medium and the use of glass beads for cell wall disruption.


RESULTS
Extractions carried out by this method provided approximately 2 microg of total DNA per cellophane disk for the filamentous fungus Trichoderma reesei. To assess the DNA's quality, we made a PCR (Polymerase Chain Reaction) amplification of a gene introduced by a transformation in this fungus's genome (hph gene), with successful results. We also confirmed the quality of the DNA by the use of Southern blotting to analyze the presence of the same gene, which was easily detected, resulting in a sharply defined and strong band.


CONCLUSIONS
The use of this method enabled us to obtain pure DNA from Trichoderma reesei, dispensing with the laborious and time-consuming steps involved in most protocols. The DNA obtained was found to be suitable for PCR and Southern blot analyses. Another advantage of this method is the fact that several samples can be processed simultaneously, growing the fungus on multiple well cell culture plates. In addition, the absence of maceration also reduces sample handling, minimizing the risks of contamination, a particularly important factor in work involving PCR.
Cassago
Alexandre
A
Laboratório de Biologia Molecular, Departamento de Genética e Evolução, Centro de Ciências Biológicas e da Saúde, Universidade Federal de São Carlos, Rodovia Washington Luís Km 235 - CEP: 13565-905 São Carlos, SP, Brazil. casslex@rocketmail.com
Panepucci
Rodrigo
R
Baião
Ana
A
Henrique-Silva
Flavio
F
D002473:Cell Wall / Q000378:metabolism; D002476:Cellophane; D015925:Cryopreservation; D003470:Culture Media / Q000378:metabolism; D004271:DNA, Fungal / Q000302:isolation & purification*; D005898:Glass; D008863:Microspheres; D009172:Mycology / Q000295:instrumentation / Q000379:methods*; D009584:Nitrogen / Q000378:metabolism; D014242:Trichoderma / Q000235:genetics* / Q000254:growth & development / Q000378:metabolism
D003470:Culture Media; D004271:DNA, Fungal; D002476:Cellophane; D009584:Nitrogen