title: Infection by Ralstonia species in cystic fibrosis patients: identification of R. pickettii and R. mannitolilytica by polymerase chain reaction.
abstract: The frequency of respiratory tract infections caused by Ralstonia species in persons with cystic fibrosis (CF) and the role of these species in CF pulmonary disease are not well documented. In part, this lack of documentation may be attributed to the difficulty in accurately identifying Ralstonia species; R. mannitolilytica and R. pickettii in particular may be misidentified as other closely related species, particularly those of the Burkholderia cepacia complex. We used polyphasic analyses to identify 42 Ralstonia isolates from sputum cultures from 38 CF patients. Several isolates that could not be identified to the species level may belong to novel Ralstonia species. We demonstrated chronic colonization by using genotyping of serial isolates recovered from the same patient. To facilitate identification of R. mannitolilytica and R. pickettii, we developed 16S ribosomal DNA-based polymerase chain reaction assays that allow sensitive and specific identification of these species.
authors.affiliation: Department of Pediatrics and Communicable Diseases, University of Michigan Medical School, Ann Arbor, 48109-0646, USA. tcoenye@umich.edu
authors.forename: Tom
authors.initials: T
authors.lastname: Coenye
authors.forename: Peter
authors.initials: P
authors.lastname: Vandamme
authors.forename: John J
authors.initials: JJ
authors.lastname: LiPuma
mesh_terms: D015373:Bacterial Typing Techniques; D003550:Cystic Fibrosis / Q000150:complications* / Q000382:microbiology*; D004275:DNA, Ribosomal / Q000235:genetics; D004591:Electrophoresis, Polyacrylamide Gel; D005798:Genes, Bacterial / Q000235:genetics; D005838:Genotype; D016946:Gram-Negative Aerobic Rods and Cocci / Q000235:genetics / Q000302:isolation & purification*; D006801:Humans; D016133:Polymerase Chain Reaction / Q000379:methods*; D011110:Polymorphism, Genetic / Q000235:genetics; D012336:RNA, Ribosomal, 16S / Q000235:genetics; D012141:Respiratory Tract Infections / Q000150:complications* / Q000382:microbiology*; D013045:Species Specificity
chemical_list: D004275:DNA, Ribosomal; D012336:RNA, Ribosomal, 16S