A relational database for cryoEM: experience at one year and 50 000 images.
For the past year we have been using a relational database as part of an automated data collection system for cryoEM. The database is vital for keeping track of the very large number of images collected and analyzed by the automated system and essential for quantitatively evaluating the utility of methods and algorithms used in the data collection. The database can be accessed using a variety of tools including specially developed Web-based interfaces that enable a user to annotate and categorize images using a Web-based form.
Fellmann
Denis
D
The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, CA 92037, USA.
Pulokas
James
J
Milligan
Ronald A
RA
Carragher
Bridget
B
Potter
Clinton S
CS
D000465:Algorithms; D020285:Cryoelectron Microscopy; D003628:Database Management Systems; D019992:Databases as Topic; D001330:Electronic Data Processing / Q000379:methods* / Q000706:statistics & numerical data; D020407:Internet; D013997:Time Factors; D014027:Tobacco Mosaic Virus / Q000648:ultrastructure