title: Macropodid herpesvirus 1 encodes genes for both thymidylate synthase and ICP34.5.
abstract: Macropodid herpesvirus 1 (MaHV-1) is an unclassified alphaherpesvirus linked with the fatal infections of kangaroos and other marsupials. During the characterisation of the internal repeat region of MaHV-1, an open reading frame (ORF) encoding for thymidylate synthase (TS) gene was identified and completely sequenced. Southern blot analysis confirmed the presence of two copies of the TS gene in the MaHV-1 genome as expected. Computer analysis of the TS ORF showed it was 948 nucleotides in length. A putative polyadenylation signal was identified 17-22 bp inside the ORF implying a minimal or absent 3' untranslated region. The predicted polypeptide was 316 amino acid residues in length and contained the highly conserved motifs for folate binding and F-dUMP binding, typical of all TS enzymes. Interestingly, MaHV-1 TS polypeptide had highest similarity to the human TS polypeptide (81%) compared to the TS polypeptides of other herpesviruses (72-75%). Immediately upstream of the TS gene, a second ORF of 510 bp, encoding a polypeptide with 170 amino acid residues, was identified. The carboxyl domain of this MaHV-1 polypeptide shared 68% similarity to a 59 amino acid motif of human herpesvirus 1 ICP34.5, identifying it as the MaHV-1 ICP34.5 homologue. This is the first report of a herpesvirus that encodes for both TS and ICP34.5.
authors.affiliation: Queensland Agricultural Biotechnology Centre, Gehrmann Laboratories, St. Lucia, Brisbane, Australia. sguliani@hotmail.com
authors.forename: Sandeep
authors.initials: S
authors.lastname: Guliani
authors.forename: Ian
authors.initials: I
authors.lastname: Polkinghorne
authors.forename: Greg A
authors.initials: GA
authors.lastname: Smith
authors.forename: Peter
authors.initials: P
authors.lastname: Young
authors.forename: John S
authors.initials: JS
authors.lastname: Mattick
authors.forename: Timothy J
authors.initials: TJ
authors.lastname: Mahony
mesh_terms: D018138:Alphaherpesvirinae / Q000235:genetics*; D000595:Amino Acid Sequence; D000818:Animals; D005814:Genes, Viral; D006801:Humans; D007614:Macropodidae / Q000821:virology*; D008969:Molecular Sequence Data; D020539:Sequence Analysis, Protein; D017386:Sequence Homology, Amino Acid; D013940:Thymidylate Synthase / Q000235:genetics*; D014764:Viral Proteins / Q000235:genetics*
chemical_list: D014764:Viral Proteins; C066469:gamma 34.5 protein, Human herpesvirus 1; D013940:Thymidylate Synthase