title: Transcription of Xanthomonas campestris prt1 gene encoding protease 1 increases during stationary phase and requires global transcription factor Clp.
abstract: Xanthomonas campestris pv. campestris produces three proteases, Prt1, Prt2, and Prt3, the first two of which are involved in pathogenicity. In this study, nucleotide A 84 nt upstream of the prt1 start codon, which is 8 nt downstream of the -10 sequence, was determined as the transcription start site by the 5(') RACE (rapid amplification of cDNA ends) method. Using Pprt1-lacZ transcriptional fusion constructs for assays, several interesting characteristics of prt1 promoter were revealed. The expression is inducible by LB medium or casein proteins and involves the global transcription factor Clp (cyclic AMP receptor protein-like protein). The region containing bp -392 to -80 relative to the prt1 translation initiation codon is required for maximal expression, in which bp -392 to -207 responds to the Clp-mediated regulation and the induction. In presence of inducers and the clp wild-type background, the levels of expression continue to increase following cell growth until 30 h after the cultures entering stationary phase. Since prt1 promoter shows no response to stressful conditions and neither growth nor cell viability is affected by prt1 mutation, Prt1 appears to be a secondary metabolite of X. campestris pv. campestris.
authors.affiliation: Pesticide Chemistry Department, Taiwan Agricultural Chemicals and Toxic Substances Research Institute, Wufeng, Taichung 413, Taiwan, Republic of China [corrected].
authors.forename: Yi-Min
authors.initials: YM
authors.lastname: Hsiao
authors.forename: Yi-Hsiung
authors.initials: YH
authors.lastname: Tseng
mesh_terms: D024506:5' Flanking Region; D001426:Bacterial Proteins; D001483:Base Sequence; D002364:Caseins / Q000494:pharmacology; D010450:Endopeptidases / Q000096:biosynthesis / Q000235:genetics*; D015964:Gene Expression Regulation, Bacterial; D007700:Kinetics; D008969:Molecular Sequence Data; D009154:Mutation; D011401:Promoter Regions, Genetic; D012697:Serine Endopeptidases / Q000096:biosynthesis / Q000235:genetics*; D014157:Transcription Factors / Q000502:physiology*; D015533:Transcriptional Activation; D016959:Xanthomonas campestris / Q000201:enzymology* / Q000235:genetics / Q000254:growth & development
chemical_list: D001426:Bacterial Proteins; D002364:Caseins; C436751:Clp protein, Xanthomonas campestris; D014157:Transcription Factors; D010450:Endopeptidases; D012697:Serine Endopeptidases