A probabilistic neural network approach for modeling and classification of bacterial growth/no-growth data.
In this paper, we propose to use probabilistic neural networks (PNNs) for classification of bacterial growth/no-growth data and modeling the probability of growth. The PNN approach combines both Bayes theorem of conditional probability and Parzen's method for estimating the probability density functions of the random variables. Unlike other neural network training paradigms, PNNs are characterized by high training speed and their ability to produce confidence levels for their classification decision. As a practical application of the proposed approach, PNNs were investigated for their ability in classification of growth/no-growth state of a pathogenic Escherichia coli R31 in response to temperature and water activity. A comparison with the most frequently used traditional statistical method based on logistic regression and multilayer feedforward artificial neural network (MFANN) trained by error backpropagation was also carried out. The PNN-based models were found to outperform linear and nonlinear logistic regression and MFANN in both the classification accuracy and ease by which PNN-based models are developed.
Department of Population Health and Reproduction, School of Veterinary Medicine, One Shields Avenue, University of California, Davis, CA 95616, USA. mnhajmeer@ucdavis.edu
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D001419:Bacteria / Q000145:classification* / Q000254:growth & development; D001499:Bayes Theorem; D015233:Models, Statistical; D016571:Neural Networks, Computer; D011336:Probability