Circadian Transcription. Thinking outside the E-Box.
The E-Box is a widely used DNA control element. Despite its brevity and broad distribution the E-Box is a remarkably versatile sequence that affects many different genetic programs, including proliferation, differentiation, tissue-specific responses, and cell death. The circadian clock is one of the latest pathways shown to employ this element. In this context, E-Boxes are likely to play a key role in establishing the robust waves of gene expression characteristic of circadian transcription. The regulatory flexibility of the E-Box hinges on the sequence ambiguity allowed at its core, the strong influence of the surrounding sequences, and the recruitment of spatially and temporally regulated E-Box-binding factors. Therefore, understanding how a particular E-Box can accomplish a specific task entails the identification and systematic analysis of these cis- and trans-acting E-Box modifiers. In the present study we compared the E-Box-containing minimal promoters of vasopressin and cyclin B1, two genes that can respond to the transcriptional oscillators driving the circadian clock and cell cycle, respectively. Results of this comparison will help elucidate the manner in which discreet DNA modules associate to either augment or restrain the activation of potential circadian E-Boxes in response to competing regulatory signals.
Unit on Temporal Gene Expression, Laboratory of Cellular and Molecular Regulation, National Institute of Mental Health, Bethesda, Maryland 20892, USA.
Estela
E
Muñoz
Michelle
M
Brewer
Ruben
R
Baler
D016475:3T3 Cells; D056930:ARNTL Transcription Factors; D000818:Animals; D001483:Base Sequence; D051792:Basic Helix-Loop-Helix Proteins; D056926:CLOCK Proteins; D002940:Circadian Rhythm; D019926:Cyclin B / Q000235:genetics; D056744:Cyclin B1; D004247:DNA / Q000378:metabolism; D004305:Dose-Response Relationship, Drug; D024721:E-Box Elements; D017930:Genes, Reporter; D006801:Humans; D008156:Luciferases / Q000378:metabolism / Q000494:pharmacology; D051379:Mice; D008969:Molecular Sequence Data; D010957:Plasmids / Q000378:metabolism; D011401:Promoter Regions, Genetic; D011485:Protein Binding; D015534:Trans-Activators / Q000378:metabolism; D014157:Transcription Factors / Q000378:metabolism; D014158:Transcription, Genetic; D014162:Transfection; D014662:Vasoconstrictor Agents / Q000494:pharmacology; D014667:Vasopressins / Q000235:genetics
D056930:ARNTL Transcription Factors; D051792:Basic Helix-Loop-Helix Proteins; D056926:CLOCK Proteins; D019926:Cyclin B; D056744:Cyclin B1; D004247:DNA; D008156:Luciferases; D015534:Trans-Activators; D014157:Transcription Factors; D014662:Vasoconstrictor Agents; D014667:Vasopressins; C538960:BMAL1 protein, human; C538961:Bmal1 protein, mouse; C534699:CCNB1 protein, human; C534700:Ccnb1 protein, mouse; C538943:CLOCK protein, human; C538944:Clock protein, mouse