title: Evaluation of commercial kits for the detection and typing of human papillomavirus in cervical swabs.
abstract: Human papillomaviruses (HPV) detection by MY consensus primers amplification within the L1 region and typing of prevalent genital HPVs by reference and commercial sets of probes was compared by PCR-ELISA systems. The specificity of commercial probes used in the L1 HPV Geno-Kit with respect to the reference probes proved to be 100%, with an overall agreement of 97.6%. The discordant results concerned only the detection of HPV 16, both as single genotype present in the sample and as multiple infections. The analytical sensitivity of the commercial probe for HPV 16 proved to be slightly less sensitive than the reference probe in the hybridisation conditions of the PCR-ELISA system. The L1 PCR-ELISA reference system was evaluated further in comparison with commercial E6/E7 consensus PCR and microplate hybridisation by typing kit. Amplified products of both the L1 and E6/E7 consensus regions were also analysed by agarose gel electrophoresis. An overall concordance of 95.2% was found. On account of its specificity and sensitivity the E6/E7 commercial system proved to be particularly useful for diagnostic laboratory, as it detects only the prevalent high risk genotypes. The agarose gel detection can therefore be used as screening test, thus reducing the costs, while the E6 E7 HPV Geno-Kit High Risk can be used when specific typing is required.
authors.affiliation: Department of Clinical and Experimental Medicine, Section of Microbiology, University of Bologna, Policlinico S Orsola, via Massarenti 9, 40138, Bologna, Italy.
authors.forename: S
authors.initials: S
authors.lastname: Venturoli
authors.forename: F
authors.initials: F
authors.lastname: Bonvicini
authors.forename: M
authors.initials: M
authors.lastname: Cricca
authors.forename: G
authors.initials: G
authors.lastname: Gallinella
authors.forename: F
authors.initials: F
authors.lastname: Giosa
authors.forename: F
authors.initials: F
authors.lastname: Farinazzo
authors.forename: G
authors.initials: G
authors.lastname: Stefanuto
authors.forename: M
authors.initials: M
authors.lastname: Musiani
authors.forename: M
authors.initials: M
authors.lastname: Zerbini
mesh_terms: D036022:Capsid Proteins; D002584:Cervix Uteri / Q000821:virology*; D015342:DNA Probes; D004279:DNA, Viral / Q000032:analysis*; D004797:Enzyme-Linked Immunosorbent Assay; D005260:Female; D006801:Humans; D009856:Oncogene Proteins, Viral / Q000235:genetics; D027383:Papillomaviridae / Q000145:classification* / Q000235:genetics / Q000302:isolation & purification*; D030361:Papillomavirus Infections / Q000821:virology; D016133:Polymerase Chain Reaction / Q000379:methods*; D011933:Reagent Kits, Diagnostic; D014412:Tumor Virus Infections / Q000821:virology
chemical_list: D036022:Capsid Proteins; D015342:DNA Probes; D004279:DNA, Viral; C114580:HPV L1 protein, Human papillomavirus; D009856:Oncogene Proteins, Viral; D011933:Reagent Kits, Diagnostic