title: HLA-DR and DQB1 gene polymorphism in the North-western Colombian population.
abstract: HLA-DRB1, DRB3, DRB4, DRB5 and DQB1 polymorphisms were studied using molecular methods in a population of 100 unrelated healthy individuals from an area in north-west Colombia (Medellin) inhabited by the "Paisa", a community with features of a genetically isolated group. The most frequently observed specificities at the DRB1 locus were *07 (16.4%) and *15 (12%), and at the DQB1 locus *02 (18.8%) and *03 (33.6%), of which *0302 was the most prevalent allele (14.3%). The most polymorphic specificities were DRB1*04, 13 and 11, and DQB1*06. Both the HLA-DRB1 and DQB1 loci were in linkage disequilibrium. Haplotypes were estimated using maximum likelihood methods. The most frequent two locus haplotype was DRB1*07-DQB1*02 (6.6%) and these specificities were in linkage disequilibrium. Several unusual possible haplotypes were observed. Both the HLA-DRB1 and DQB1 locus were in Hardy-Weinberg equilibrium.
authors.affiliation: Corporación para Investigaciones Biológicas, Medellín, Colombia, South America. paulac@epm.net.co
authors.forename: P A
authors.initials: PA
authors.lastname: Correa
authors.forename: W C
authors.initials: WC
authors.lastname: Whitworth
authors.forename: T
authors.initials: T
authors.lastname: Kuffner
authors.forename: J
authors.initials: J
authors.lastname: McNicholl
authors.forename: J-M
authors.initials: JM
authors.lastname: Anaya
mesh_terms: D003105:Colombia; D006683:HLA-DQ Antigens / Q000235:genetics*; D059866:HLA-DQ beta-Chains; D006684:HLA-DR Antigens / Q000235:genetics*; D006239:Haplotypes; D006801:Humans; D015810:Linkage Disequilibrium; D011110:Polymorphism, Genetic
chemical_list: D006683:HLA-DQ Antigens; D059866:HLA-DQ beta-Chains; C069051:HLA-DQB1 antigen; D006684:HLA-DR Antigens