HMM-based databases in InterPro.
Protein family databases are an important resource for protein annotation and understanding protein evolution and function. In recent years hidden Markov models (HMMs) have become one of the key technologies used for detection of members of these families. This paper reviews the Pfam, TIGRFAMs and SMART databases that use the profile-HMMs provided by the HMMER package.
Bateman
Alex
A
Pfam Group, The Wellcome Trust Sanger Institute, Hinxton, UK.
Haft
Daniel H
DH
D019295:Computational Biology; D030562:Databases, Protein; D011506:Proteins / Q000737:chemistry / Q000145:classification; D016415:Sequence Alignment; D020539:Sequence Analysis, Protein; D012984:Software
D011506:Proteins