Intracellular signal propagation in a two-dimensional autocatalytic reaction model.
We study a simple reaction scheme in a two-dimensional lattice of particles or molecules with a refractory state. We analyze the dynamics of the propagating front as a function of physical-chemical properties of the host medium. The anisotropy of the medium significantly affects the smoothness of the wave front. Similarly, if particles or molecules may diffuse slowly to neighboring sites, then the front wave is more likely to be irregular. Both situations affect the ability of the whole system to relax to the original state, which is a required feature in the biological cells. Attempts to map this simple reaction scheme to reactions involved in the intracellular pathways suggest that, in some cases, signal transduction might take both connotation of a random walk and a propagating wave, depending on the local density of the medium. In particular, a sufficient condition for the appearance of waves in high-density regions of the media, is the existence of at least one autocatalytic reaction in the chain of reactions characterizing the pathway.
D055592:Biophysical Phenomena; D001703:Biophysics; D002384:Catalysis; D003198:Computer Simulation; D003593:Cytoplasm / Q000378:metabolism; D007700:Kinetics; D008962:Models, Theoretical; D009010:Monte Carlo Method; D015398:Signal Transduction; D012984:Software