title: A fluorescence in situ hybridization-based assay for improved detection of lung cancer cells in bronchial washing specimens.
abstract: BACKGROUND
  Interphase fluorescence in situ hybridization (FISH) is a powerful tool for detecting chromosome and locus-specific changes in tumor cells. We developed a FISH-based assay to detect genetic changes in bronchial washing specimens of lung carcinoma patients.
  
  
  METHODS
  The assay uses a mixture of fluorescently labeled probes to the centromeric region of chromosome 1 and to the 5p15, 8q24 (site of the c-myc gene), and 7p12 (site of the EGFR gene) loci to assess cells in bronchial washing specimens for chromosomal abnormalities indicative of lung carcinoma. The FISH assay was performed on 74 specimens that had been assessed previously for evidence of malignancy by routine cytology with Pap staining.
  
  
  RESULTS
  Forty-eight patients had histologically confirmed lung carcinoma and 26 patients had a clinical diagnosis that was negative for lung carcinoma. FISH analysis was performed without knowledge of the patient's clinical information. The finding of six or more epithelial cells with gains of two or more chromosome regions was considered a positive FISH result (i.e., evidence of malignancy). The sensitivity of FISH for the detection of lung carcinoma was 82% in this set of specimens compared with a 54% sensitivity by design for cytology (FISH vs. cytology, P = 0.007). FISH detected 15 of 18 specimens that were falsely negative by cytology. The specificities of FISH and cytology were 82% and 100%, respectively, and were not significantly different (P = 0.993).
  
  
  CONCLUSIONS
  The data indicate a potential utility of the FISH assay as an adjunct to bronchial washing cytology in routine clinical practice.
authors.affiliation: Vysis, Inc., Downers Grove, Illinois 60515, USA. isokolova@vysis.com
authors.forename: Irina A
authors.initials: IA
authors.lastname: Sokolova
authors.forename: Lukas
authors.initials: L
authors.lastname: Bubendorf
authors.forename: Anna
authors.initials: A
authors.lastname: O'Hare
authors.forename: Mona S
authors.initials: MS
authors.lastname: Legator
authors.forename: Kris K B
authors.initials: KK
authors.lastname: Jacobson
authors.forename: Bruno
authors.initials: B
authors.lastname: Grilli B S
authors.forename: Peter
authors.initials: P
authors.lastname: Dalquen
authors.forename: Kevin C
authors.initials: KC
authors.lastname: Halling
authors.forename: Michael
authors.initials: M
authors.lastname: Tamm
authors.forename: Steven A
authors.initials: SA
authors.lastname: Seelig
authors.forename: Larry E
authors.initials: LE
authors.lastname: Morrison
mesh_terms: D000230:Adenocarcinoma / Q000175:diagnosis*; D001992:Bronchoalveolar Lavage Fluid / Q000166:cytology*; D005240:Feasibility Studies; D006801:Humans; D017404:In Situ Hybridization, Fluorescence; D008175:Lung Neoplasms / Q000175:diagnosis*; D012372:ROC Curve; D012680:Sensitivity and Specificity