title: Genome sequence of Streptococcus mutans UA159, a cariogenic dental pathogen.
abstract: Streptococcus mutans is the leading cause of dental caries (tooth decay) worldwide and is considered to be the most cariogenic of all of the oral streptococci. The genome of S. mutans UA159, a serotype c strain, has been completely sequenced and is composed of 2,030,936 base pairs. It contains 1,963 ORFs, 63% of which have been assigned putative functions. The genome analysis provides further insight into how S. mutans has adapted to surviving the oral environment through resource acquisition, defense against host factors, and use of gene products that maintain its niche against microbial competitors. S. mutans metabolizes a wide variety of carbohydrates via nonoxidative pathways, and all of these pathways have been identified, along with the associated transport systems whose genes account for almost 15% of the genome. Virulence genes associated with extracellular adherent glucan production, adhesins, acid tolerance, proteases, and putative hemolysins have been identified. Strain UA159 is naturally competent and contains all of the genes essential for competence and quorum sensing. Mobile genetic elements in the form of IS elements and transposons are prominent in the genome and include a previously uncharacterized conjugative transposon and a composite transposon containing genes for the synthesis of antibiotics of the gramicidin/bacitracin family; however, no bacteriophage genomes are present.
authors.affiliation: Department of Microbiology and Immunology, University of Oklahoma Health Sciences Center, Oklahoma City, OK 73104, USA.
authors.forename: Dragana
authors.initials: D
authors.lastname: Ajdić
authors.forename: William M
authors.initials: WM
authors.lastname: McShan
authors.forename: Robert E
authors.initials: RE
authors.lastname: McLaughlin
authors.forename: Gorana
authors.initials: G
authors.lastname: Savić
authors.forename: Jin
authors.initials: J
authors.lastname: Chang
authors.forename: Matthew B
authors.initials: MB
authors.lastname: Carson
authors.forename: Charles
authors.initials: C
authors.lastname: Primeaux
authors.forename: Runying
authors.initials: R
authors.lastname: Tian
authors.forename: Steve
authors.initials: S
authors.lastname: Kenton
authors.forename: Honggui
authors.initials: H
authors.lastname: Jia
authors.forename: Shaoping
authors.initials: S
authors.lastname: Lin
authors.forename: Yudong
authors.initials: Y
authors.lastname: Qian
authors.forename: Shuling
authors.initials: S
authors.lastname: Li
authors.forename: Hua
authors.initials: H
authors.lastname: Zhu
authors.forename: Fares
authors.initials: F
authors.lastname: Najar
authors.forename: Hongshing
authors.initials: H
authors.lastname: Lai
authors.forename: Jim
authors.initials: J
authors.lastname: White
authors.forename: Bruce A
authors.initials: BA
authors.lastname: Roe
authors.forename: Joseph J
authors.initials: JJ
authors.lastname: Ferretti
mesh_terms: D001483:Base Sequence; D002326:Cariogenic Agents; D002455:Cell Division; D002473:Cell Wall; D004251:DNA Transposable Elements; D004269:DNA, Bacterial; D015964:Gene Expression Regulation, Bacterial; D016680:Genome, Bacterial; D006801:Humans; D008969:Molecular Sequence Data; D013295:Streptococcus mutans / Q000235:genetics* / Q000378:metabolism; D014158:Transcription, Genetic
chemical_list: D002326:Cariogenic Agents; D004251:DNA Transposable Elements; D004269:DNA, Bacterial