title: A peptide chain release factor 2 affects the stability of UGA-containing transcripts in Arabidopsis chloroplasts.
abstract: Positional cloning of the hcf109 (high chlorophyll fluorescence) mutation in Arabidopsis has identified a nucleus-encoded, plastid-localized release factor 2-like protein, AtprfB, indicating that the processes of translational termination in chloroplasts resemble those of eubacteria. Control of atprfB expression by light and tissues is connected to chloroplast development. A point mutation at the last nucleotide of the second intron causes a new splice site farther downstream, resulting in a deletion of seven amino acid residues in the N-terminal region of the Hcf109 protein. The mutation causes decreased stability of UGA-containing mRNAs. Our data suggest that transcripts with UGA stop codons are terminated exclusively by AtprfB in chloroplasts and that AtprfB is involved in the regulation of both mRNA stability and protein synthesis. Furthermore, sequence data reveal a +1 frameshift at an internal in-frame TGA stop codon in the progenitor prfB gene of cyanobacteria. The expression pattern and functions of atprfB could reflect evolutionary driving forces toward the conservation of TGA stop codons exclusively in plastid genomes of land plants.
authors.affiliation: Ludwig-Maximilians-Universität München, Department I, Botanik, Menzingerstrasse 67, 80638 München, Germany. meurer@botanik.biologie.uni-muenchen.de
authors.forename: Jörg
authors.initials: J
authors.lastname: Meurer
authors.forename: Lina
authors.initials: L
authors.lastname: Lezhneva
authors.forename: Katrin
authors.initials: K
authors.lastname: Amann
authors.forename: Manfred
authors.initials: M
authors.lastname: Gödel
authors.forename: Staver
authors.initials: S
authors.lastname: Bezhani
authors.forename: Irena
authors.initials: I
authors.lastname: Sherameti
authors.forename: Ralf
authors.initials: R
authors.lastname: Oelmüller
mesh_terms: D000595:Amino Acid Sequence; D017360:Arabidopsis / Q000235:genetics / Q000378:metabolism*; D029681:Arabidopsis Proteins / Q000235:genetics* / Q000378:metabolism; D001419:Bacteria / Q000235:genetics / Q000378:metabolism; D001483:Base Sequence; D002736:Chloroplasts / Q000235:genetics / Q000378:metabolism; D002874:Chromosome Mapping; D018388:Codon, Terminator / Q000235:genetics* / Q000378:metabolism; D000458:Cyanobacteria / Q000235:genetics / Q000378:metabolism; D016368:Frameshift Mutation; D018506:Gene Expression Regulation, Plant / Q000528:radiation effects; D008027:Light; D008969:Molecular Sequence Data; D009154:Mutation; D010443:Peptide Chain Termination, Translational / Q000235:genetics; D010454:Peptide Termination Factors / Q000235:genetics* / Q000378:metabolism; D011132:Polyribosomes / Q000378:metabolism; D014176:Protein Biosynthesis; D018747:RNA, Chloroplast / Q000235:genetics / Q000378:metabolism; D012333:RNA, Messenger / Q000235:genetics / Q000378:metabolism; D017386:Sequence Homology, Amino Acid; D014158:Transcription, Genetic / Q000235:genetics
chemical_list: D029681:Arabidopsis Proteins; D018388:Codon, Terminator; D010454:Peptide Termination Factors; C472144:PrfB protein, Arabidopsis; D018747:RNA, Chloroplast; D012333:RNA, Messenger; C041460:peptide chain termination release factor 2