Recent advances in helix-coil theory.
Peptide helices in solution form a complex mixture of all helix, all coil or, most frequently, central helices with frayed coil ends. In order to interpret experiments on helical peptides and make theoretical predictions on helices, it is therefore essential to use a helix-coil theory that takes account of this equilibrium. The original Zimm-Bragg and Lifson-Roig helix-coil theories have been greatly extended in the last 10 years to include additional interactions. These include preferences for the N-cap, N1, N2, N3 and C-cap positions, capping motifs, helix dipoles, side chain interactions and 3(10)-helix formation. These have been applied to determine energies for these preferences from experimental data and to predict the helix contents of peptides. This review discusses these newly recognised structural features of helices and how they have been included in helix-coil models.
Doig
Andrew J
AJ
Department of Biomolecular Sciences, UMIST, PO Box 88, Manchester M60 1QD, UK. andrew.doig@umist.ac.uk
D010455:Peptides / Q000737:chemistry*; D011487:Protein Conformation
D010455:Peptides