title: Evolutionary affinity and selectivity optimization of a pesticide-selective antibody utlizing a hapten-selective immunoglobulin repertoire.
abstract: Selectivity and sensitivity are considered as pivotal criteria for the quality of immunochemical assay designs in environmental analysis. They are essentially determined by the variable domains of the implemented antibody. The variable domains of a triazine-selective single-chain Fv (scFv) were genetically engineered by stringent molecular evolution in order to optimize analytical characteristics of the corresponding atrazine immunoassay. Gene variation of the template antibody by sequential shuffling against the variable heavy and light chain repertoire of a triazine-selective immunoglobulin library was enhanced by introducing additional point mutatons. Improved scFv variants were selected by phage display employing an atrazine derivative. By this means the paramounting affinity of the initial scFv to sebuthylazine was shifted for the mutant antibodies toward a preferential recognition of the envisaged target analyte atrazine. In addition, the detection limit of the atrazine assaywas significantly improved by factor 25 from 5.1 microg/L for the initial template antibody to 0.2 microg/L for the mutant antibodies. The contribution of the engineered antibody variants to the assay improvement is also reflected by a shift of the equilibrium dissociation constant KD from 1.27 x 10(-8) M of the template antibody to 7.46 x 10(-10) M of the optimized variant. Sequence analysis revealed a bias of amino acid substitutions in the first two complementarity-determining regions (CDR) and the flanking framework regions of both variable chains for the shuffled clones as well as a deletion in the CDR3 of the light chain. Particularly the mutations of the VL domain turned out to have a decisive impact on the alterations in the analytical performance of the engineered scFv mutants. The application of the mutant antibodies for the atrazine determination of soil samples revealed consistency with HPLC data within the experimental error.
authors.affiliation: Technische Universität München, Center of Life Sciences Weihenstephan, Alte Akademie 12, D-85350 Freising, Germany. kramer@wzw.tum.de
authors.forename: Karl
authors.initials: K
authors.lastname: Kramer
mesh_terms: D000818:Animals; D001280:Atrazine / Q000032:analysis*; D002851:Chromatography, High Pressure Liquid; D022801:Complementarity Determining Regions / Q000235:genetics*; D004784:Environmental Monitoring / Q000379:methods; D019143:Evolution, Molecular; D005818:Genetic Engineering; D006540:Herbicides / Q000032:analysis*; D007118:Immunoassay / Q000379:methods*; D007136:Immunoglobulins / Q000032:analysis / Q000235:genetics; D051379:Mice; D008807:Mice, Inbred BALB C; D012989:Soil Pollutants / Q000032:analysis*
chemical_list: D022801:Complementarity Determining Regions; D006540:Herbicides; D007136:Immunoglobulins; D012989:Soil Pollutants; D001280:Atrazine