E-MSD: the European Bioinformatics Institute Macromolecular Structure Database.
The E-MSD macromolecular structure relational database (http://www.ebi.ac.uk/msd) is designed to be a single access point for protein and nucleic acid structures and related information. The database is derived from Protein Data Bank (PDB) entries. Relational database technologies are used in a comprehensive cleaning procedure to ensure data uniformity across the whole archive. The search database contains an extensive set of derived properties, goodness-of-fit indicators, and links to other EBI databases including InterPro, GO, and SWISS-PROT, together with links to SCOP, CATH, PFAM and PROSITE. A generic search interface is available, coupled with a fast secondary structure domain search tool.
Boutselakis
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EMBL Outstation, The European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK.
Dimitropoulos
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D
Fillon
J
J
Golovin
A
A
Henrick
K
K
Hussain
A
A
Ionides
J
J
John
M
M
Keller
P A
PA
Krissinel
E
E
McNeil
P
P
Naim
A
A
Newman
R
R
Oldfield
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T
Pineda
J
J
Rachedi
A
A
Copeland
J
J
Sitnov
A
A
Sobhany
S
S
Suarez-Uruena
A
A
Swaminathan
J
J
Tagari
M
M
Tate
J
J
Tromm
S
S
Velankar
S
S
Vranken
W
W
D000818:Animals; D001665:Binding Sites; D019295:Computational Biology; D030561:Databases, Nucleic Acid; D030562:Databases, Protein; D005060:Europe; D008024:Ligands; D017433:Protein Structure, Secondary; D011506:Proteins / Q000737:chemistry / Q000378:metabolism; D015203:Reproducibility of Results; D016415:Sequence Alignment; D012984:Software
D008024:Ligands; D011506:Proteins