GOBASE--a database of mitochondrial and chloroplast information.
GOBASE is a relational database containing integrated sequence, RNA secondary structure and biochemical and taxonomic information about organelles. GOBASE release 6 (summer 2002) contains over 130 000 mitochondrial sequences, an increase of 37% over the previous release, and more than 30 000 chloroplast sequences in a new auxiliary database. To handle this flood of new data, we have designed and implemented GOpop, a Java system for population and verification of the database. We have also implemented a more powerful and flexible user interface using the PHP programming language. http://megasun.bch.umontreal.ca/gobase/gobase.html.
O'Brien
Emmet A
EA
Program in Evolutionary Biology, Canadian Institute for Advanced Research, Departement de Biochimie, Universite de Montreal, 2900 Boulevard Edouard-Montpetit, Montreal, Quebec H3T 1J4, Canada. eobrien@bch.umontreal.ca
Badidi
Elarbi
E
Barbasiewicz
Ania
A
deSousa
Cristina
C
Lang
B Franz
BF
Burger
Gertraud
G
D000818:Animals; D002736:Chloroplasts / Q000235:genetics*; D030541:Databases, Genetic; D019143:Evolution, Molecular; D016678:Genome; D008928:Mitochondria / Q000235:genetics*; D024101:Mitochondrial Proteins / Q000737:chemistry; D009690:Nucleic Acid Conformation; D010940:Plant Proteins / Q000737:chemistry; D012313:RNA / Q000737:chemistry; D018747:RNA, Chloroplast / Q000737:chemistry; D000077278:RNA, Mitochondrial; D014584:User-Computer Interface
D024101:Mitochondrial Proteins; D010940:Plant Proteins; D018747:RNA, Chloroplast; D000077278:RNA, Mitochondrial; D012313:RNA