Simulating the XANES of metalloenzymes - a case study.
The analysis of XANES patterns is very indicative for screening samples. Powerful X-ray absorption spectroscopy data-analysis programs can simulate these patterns. Here, a case study on two structural motifs is presented: a non-heme Fe site (2-His-1-carboxylate motif) and the metallo beta-lactamase dinuclear Zn site. Simulations of the edge shapes for different structural models will be compared with experimental results, pointing out limitations and challenges. The influence of single neighbouring atoms in the first and second shell on the resulting XANES pattern is discussed. Insights into catalytic mechanisms and the requirements for future theory development are addressed.
Mijovilovich
Ana
A
EMBL c/o DESY, Notkestrasse 85, Geb 25A, 22607 Hamburg, Germany.
Meyer-Klaucke
Wolfram
W
D015502:Absorptiometry, Photon / Q000379:methods; D000595:Amino Acid Sequence; D004798:Enzymes / Q000737:chemistry*; D008667:Metalloproteins / Q000737:chemistry*; D008958:Models, Molecular; D010651:Phenylalanine Hydroxylase / Q000737:chemistry; D011487:Protein Conformation; D015032:Zinc / Q000032:analysis; D001618:beta-Lactamases / Q000737:chemistry*
D004798:Enzymes; D008667:Metalloproteins; D010651:Phenylalanine Hydroxylase; D001618:beta-Lactamases; D015032:Zinc