MAVG: locating non-overlapping maximum average segments in a given sequence.
CONCLUSIONS
MAVG is a software tool for finding k non-overlapping maximum-average segments that are sufficiently long in a given sequence of real numbers, for any k > 0. It has applications in several areas of biomolecular sequence analysis including locating GC-rich regions and CpG islands in a genomic sequence, and annotating multiple sequence alignments.


BACKGROUND
http://iubio.bio.indiana.edu/soft/molbio/pattern/cpg_islands/.
Lin
Yaw-Ling
YL
Department of Computer Science and Information Management, Providence University, Shalu 433, Taiwan.
Huang
Xiaoqiu
X
Jiang
Tao
T
Chao
Kun-Mao
KM
D000465:Algorithms; D018899:CpG Islands / Q000235:genetics*; D005807:Genes, Overlapping / Q000235:genetics; D015894:Genome, Human; D006801:Humans; D016415:Sequence Alignment / Q000379:methods*; D017422:Sequence Analysis, DNA / Q000379:methods*; D012984:Software