cDNA sequences of the authentic keratins 8 and 18 in zebrafish.
From the zebrafish Danio rerio, we have cDNA cloned and sequenced a novel type II and a novel type I keratin, termed DreK8 and DreK18, respectively. We identified DreK8/18 as the true orthologs of the human keratin pair K8/18 as follows: (i) MALDI-MS assignment to the biochemically identified K8 and K18 candidates that are co-expressed in simple epithelia and absent in epidermal keratinocytes; (ii) multiple sequence alignments and phylogenetic tree analysis, showing that DreK8, within the phylogenetic tree of type II keratins, forms a highly bootstrap-supported branch together with K8 from goldfish and rainbow trout, whereas DreK18, within the phylogenetic tree of type I keratins, groups with the K18 sequences from all other vertebrates studied; (iii) presence of a conserved motif in the tail domain of DreK8 (VxKxxETxDGxxVSESSxV) that is typical for all hitherto sequenced K8 orthologs. Moreover, several zebrafish type II keratin sequences published by other authors have now been assigned to epidermal keratins, previously identified biochemically.
Schaffeld
Michael
M
Institute of Zoology, Johannes Gutenburg University, Mainz, Germany. schaffel@mail.uni-mainz.de
Knappe
Maren
M
Hunzinger
Christian
C
Markl
Jürgen
J
D000595:Amino Acid Sequence; D000818:Animals; D003001:Cloning, Molecular; D006801:Humans; D053538:Keratin-18; D053533:Keratin-8; D007633:Keratins / Q000737:chemistry* / Q000235:genetics / Q000378:metabolism; D008969:Molecular Sequence Data; D010802:Phylogeny; D016415:Sequence Alignment; D014018:Tissue Distribution; D015027:Zebrafish; D029961:Zebrafish Proteins / Q000737:chemistry* / Q000235:genetics / Q000378:metabolism
C426203:KRT8 protein, human; D053538:Keratin-18; D053533:Keratin-8; D029961:Zebrafish Proteins; C479873:krt18a.1 protein, zebrafish; C486596:krt8 protein, zebrafish; D007633:Keratins