MAPPFinder: using Gene Ontology and GenMAPP to create a global gene-expression profile from microarray data.
MAPPFinder is a tool that creates a global gene-expression profile across all areas of biology by integrating the annotations of the Gene Ontology (GO) Project with the free software package GenMAPP http://www.GenMAPP.org. The results are displayed in a searchable browser, allowing the user to rapidly identify GO terms with over-represented numbers of gene-expression changes. Clicking on GO terms generates GenMAPP graphical files where gene relationships can be explored, annotated, and files can be freely exchanged.
Doniger
Scott W
SW
Gladstone Institute of Cardiovascular Disease, University of California, San Francisco, CA 94141-9100, USA.
Salomonis
Nathan
N
Dahlquist
Kam D
KD
Vranizan
Karen
K
Lawlor
Steven C
SC
Conklin
Bruce R
BR
D000818:Animals; D002455:Cell Division / Q000235:genetics; D004622:Embryo, Mammalian / Q000378:metabolism; D015870:Gene Expression; D020869:Gene Expression Profiling / Q000379:methods*; D018507:Gene Expression Regulation, Developmental; D051379:Mice; D020411:Oligonucleotide Array Sequence Analysis; D012984:Software; D013997:Time Factors