title: Ends-out, or replacement, gene targeting in Drosophila.
abstract: Ends-in and ends-out refer to the two arrangements of donor DNA that can be used for gene targeting. Both have been used for targeted mutagenesis, but require donors of differing design. Ends-out targeting is more frequently used in mice and yeast because it gives a straightforward route to replace or delete a target locus. Although ends-in targeting has been successful in Drosophila, an attempt at ends-out targeting failed. To test whether ends-out targeting could be used in Drosophila, we applied two strategies for ends-out gene replacement at the endogenous yellow (y) locus in Drosophila. First, a mutant allele was rescued by replacement with an 8-kb y(+) DNA fragment at a rate of approximately 1/800 gametes. Second, a wild-type gene was disrupted by the insertion of a marker gene in exon 1 at a rate of approximately 1/380 gametes. The I-SceI endonuclease component alone is not sufficient for targeting: the FLP recombinase is also needed to generate the extrachromosomal donor. When both components are used we find that ends-out targeting can be approximately as efficient as ends-in targeting, and is likely to be generally useful for Drosophila gene targeting.
authors.affiliation: Stowers Institute for Medical Research, Kansas City, MO 64110, USA.
authors.forename: Wei J
authors.initials: WJ
authors.lastname: Gong
authors.forename: Kent G
authors.initials: KG
authors.lastname: Golic
mesh_terms: D000483:Alleles; D000818:Animals; D015139:Blotting, Southern; D004247:DNA / Q000378:metabolism; D004330:Drosophila / Q000235:genetics*; D005091:Exons; D018390:Gene Targeting; D005821:Genetic Techniques; D006358:Hot Temperature; D008957:Models, Genetic; D016296:Mutagenesis; D009154:Mutation; D011995:Recombination, Genetic
chemical_list: D004247:DNA