title: A promoter activity is present in the DNA sequence corresponding to the hepatitis C virus 5' UTR.
abstract: The hepatitis C virus (HCV) 5' untranslated region (UTR) has been extensively studied with regard to its internal ribosomal entry site (IRES) activity. In this work we present results suggesting the existence of a strong promoter activity carried by the DNA sequence corresponding to the HCV 5' UTR. This activity was not detected when the HCV 5' UTR sequence was replaced by HCV 3' UTR or poliovirus 5' UTR sequences. These results were further confirmed by using bicistronic constructions. We demonstrated the presence of an mRNA initiated in this 5' UTR sequence and located the initiation site by the 5' RACE method at nucleotide 67. Furthermore, northern experiments and flow cytometry analysis showed the unambiguous activity of such a promoter sequence in stably transfected cells. Our results strongly suggest that the data obtained using bicistronic DNA constructs carrying the HCV 5' UTR should be analyzed not only at the translational but also at the transcriptional level.
authors.affiliation: UMR 5097 CNRS, Université Victor Segalen Bordeaux 2, Institut Fédératif de Recherches 66 Pathologies Infectieuses, 146 rue Léo Saignat, 33076 Bordeaux cedex, France.
authors.forename: Estelle
authors.initials: E
authors.lastname: Dumas
authors.forename: Cathy
authors.initials: C
authors.lastname: Staedel
authors.forename: Marie
authors.initials: M
authors.lastname: Colombat
authors.forename: Sandrine
authors.initials: S
authors.lastname: Reigadas
authors.forename: Sandrine
authors.initials: S
authors.lastname: Chabas
authors.forename: Thérèse
authors.initials: T
authors.lastname: Astier-Gin
authors.forename: Annie
authors.initials: A
authors.lastname: Cahour
authors.forename: Simon
authors.initials: S
authors.lastname: Litvak
authors.forename: Michel
authors.initials: M
authors.lastname: Ventura
mesh_terms: D020121:5' Untranslated Regions / Q000737:chemistry / Q000235:genetics*; D001483:Base Sequence; D018076:DNA, Complementary / Q000235:genetics; D015870:Gene Expression; D016679:Genome, Viral; D049452:Green Fluorescent Proteins; D016174:Hepacivirus / Q000235:genetics*; D006801:Humans; D008164:Luminescent Proteins / Q000235:genetics / Q000378:metabolism; D008969:Molecular Sequence Data; D011401:Promoter Regions, Genetic / Q000235:genetics*; D011993:Recombinant Fusion Proteins / Q000235:genetics / Q000378:metabolism; D012689:Sequence Homology, Nucleic Acid; D024363:Transcription Initiation Site; D014158:Transcription, Genetic; D014162:Transfection; D014407:Tumor Cells, Cultured
chemical_list: D020121:5' Untranslated Regions; D018076:DNA, Complementary; D008164:Luminescent Proteins; D011993:Recombinant Fusion Proteins; D049452:Green Fluorescent Proteins