title: Conformation of a group 2 late embryogenesis abundant protein from soybean. Evidence of poly (L-proline)-type II structure.
abstract: Late embryogenesis abundant (LEA) proteins are members of a large group of hydrophilic, glycine-rich proteins found in plants, algae, fungi, and bacteria known collectively as hydrophilins that are preferentially expressed in response to dehydration or hyperosmotic stress. Group 2 LEA (dehydrins or responsive to abscisic acid) proteins are postulated to stabilize macromolecules against damage by freezing, dehydration, ionic, or osmotic stress. However, the structural and physicochemical properties of group 2 LEA proteins that account for such functions remain unknown. We have analyzed the structural properties of a recombinant form of a soybean (Glycine max) group 2 LEA (rGmDHN1). Differential scanning calorimetry of purified rGmDHN1 demonstrated that the protein does not display a cooperative unfolding transition upon heating. Ultraviolet absorption and circular dichroism spectroscopy revealed that the protein is in a largely hydrated and unstructured conformation in solution. However, ultraviolet absorption and circular dichroism measurements collected at different temperatures showed that the protein exists in equilibrium between two extended conformational states: unordered and left-handed extended helical or poly (L-proline)-type II structures. It is estimated that 27% of the residues of rGmDHN1 adopt or poly (L-proline)-type II-like helical conformation at 12 degrees C. The content of extended helix gradually decreases to 15% as the temperature is increased to 80 degrees C. Studies of the conformation of the protein in solution in the presence of liposomes, trifluoroethanol, and sodium dodecyl sulfate indicated that rGmDHN1 has a very low intrinsic ability to adopt alpha-helical structure and to interact with phospholipid bilayers through amphipathic alpha-helices. The ability of the protein to remain in a highly extended conformation at low temperatures could constitute the basis of the functional role of GmDHN1 in the prevention of freezing, desiccation, ionic, or osmotic stress-related damage to macromolecular structures.
authors.affiliation: Department of Biochemistry and Molecular Biology, 355 Noble Research Center, Oklahoma State University, Stillwater, Oklahoma 74078-0454, USA.
authors.forename: Jose L
authors.initials: JL
authors.lastname: Soulages
authors.forename: Kangmin
authors.initials: K
authors.lastname: Kim
authors.forename: Estela L
authors.initials: EL
authors.lastname: Arrese
authors.forename: Christina
authors.initials: C
authors.lastname: Walters
authors.forename: John C
authors.initials: JC
authors.lastname: Cushman
mesh_terms: D000222:Adaptation, Physiological / Q000502:physiology; D000595:Amino Acid Sequence; D002942:Circular Dichroism; D018506:Gene Expression Regulation, Plant; D050356:Lipid Metabolism; D008055:Lipids / Q000737:chemistry; D008081:Liposomes / Q000494:pharmacology; D008969:Molecular Sequence Data; D010940:Plant Proteins / Q000737:chemistry / Q000235:genetics* / Q000378:metabolism*; D011392:Proline / Q000737:chemistry / Q000378:metabolism*; D011487:Protein Conformation; D017433:Protein Structure, Secondary / Q000187:drug effects; D012967:Sodium Dodecyl Sulfate / Q000494:pharmacology; D030262:Soybean Proteins / Q000737:chemistry / Q000235:genetics / Q000378:metabolism*; D013025:Glycine max / Q000235:genetics / Q000378:metabolism*; D013056:Spectrophotometry, Ultraviolet; D013696:Temperature; D014270:Trifluoroethanol / Q000494:pharmacology; D014443:Tyrosine / Q000737:chemistry / Q000378:metabolism
chemical_list: D008055:Lipids; D008081:Liposomes; D010940:Plant Proteins; D030262:Soybean Proteins; C066246:late embryogenesis abundant protein, plant; C070556:dehydrin proteins, plant; D012967:Sodium Dodecyl Sulfate; D014443:Tyrosine; D014270:Trifluoroethanol; D011392:Proline