title: Modified pulsed-field gel electrophoresis protocol for typing of enterococci.
abstract: Controlling the spread of vancomycin-resistant enterococci (VRE) is an important task in hospital epidemiology. Pulsed-field gel electrophoresis (PFGE) has become the golden standard for molecular epidemiological characterisation of enterococcal isolates. For separation of DNA fragments by PFGE, different electrophoresis conditions have been recommended, but none of these protocols allows a satisfactory separation of both small and large DNA fragments of enterococci simultaneously. In this study we have speeded up the preparation of chromosomal DNA and defined new electrophoresis conditions that enhance separation of small and large DNA fragments for subtyping of enterococci with a 24 h PFGE.
authors.affiliation: Division of Clinical Microbiology, Department of Molecular and Clinical Medicine, Faculty of Health Sciences, Linköping University, Linköping, Sweden. baharak.saeedi@lio.se
authors.forename: Baharak
authors.initials: B
authors.lastname: Saeedi
authors.forename: Anita
authors.initials: A
authors.lastname: Hällgren
authors.forename: Jon
authors.initials: J
authors.lastname: Jonasson
authors.forename: Lennart E
authors.initials: LE
authors.lastname: Nilsson
authors.forename: Håkan
authors.initials: H
authors.lastname: Hanberger
authors.forename: Barbro
authors.initials: B
authors.lastname: Isaksson
mesh_terms: D015373:Bacterial Typing Techniques / Q000379:methods*; D002876:Chromosomes, Bacterial / Q000737:chemistry; D003428:Cross Infection / Q000382:microbiology; D004269:DNA, Bacterial / Q000235:genetics / Q000302:isolation & purification*; D016521:Electrophoresis, Gel, Pulsed-Field / Q000379:methods*; D013293:Enterococcus faecalis / Q000737:chemistry / Q000145:classification* / Q000187:drug effects / Q000235:genetics; D016908:Gram-Positive Bacterial Infections / Q000382:microbiology; D006801:Humans; D013997:Time Factors; D020713:Vancomycin Resistance / Q000235:genetics
chemical_list: D004269:DNA, Bacterial