Bacterioplankton community shifts in an arctic lake correlate with seasonal changes in organic matter source.
Seasonal shifts in bacterioplankton community composition in Toolik Lake, a tundra lake on the North Slope of Alaska, were related to shifts in the source (terrestrial versus phytoplankton) and lability of dissolved organic matter (DOM). A shift in community composition, measured by denaturing gradient gel electrophoresis (DGGE) of 16S rRNA genes, occurred at 4 degrees C in near-surface waters beneath seasonal ice and snow cover in spring. This shift was associated with an annual peak in bacterial productivity ([(14)C]leucine incorporation) driven by the large influx of labile terrestrial DOM associated with snow meltwater. A second shift occurred after the flux of terrestrial DOM had ended in early summer as ice left the lake and as the phytoplankton community developed. Bacterioplankton communities were composed of persistent populations present throughout the year and transient populations that appeared and disappeared. Most of the transient populations could be divided into those that were advected into the lake with terrestrial DOM in spring and those that grew up from low concentrations during the development of the phytoplankton community in early summer. Sequencing of DNA in DGGE bands demonstrated that most bands represented single ribotypes and that matching bands from different samples represented identical ribotypes. Bacteria were identified as members of globally distributed freshwater phylogenetic clusters within the alpha- and beta-Proteobacteria, the Cytophaga-Flavobacteria-Bacteroides group, and the ACTINOBACTERIA:
Crump
Byron C
BC
The Ecosystems Center, Marine Biological Laboratory, Woods Hole, Massachusetts 02543, USA. bcrump@mbl.edu
Kling
George W
GW
Bahr
Michele
M
Hobbie
John E
JE
D000818:Animals; D001110:Arctic Regions; D001419:Bacteria / Q000145:classification / Q000235:genetics / Q000302:isolation & purification*; D004275:DNA, Ribosomal / Q000032:analysis; D017753:Ecosystem; D004586:Electrophoresis; D005618:Fresh Water / Q000382:microbiology*; D008969:Molecular Sequence Data; D009930:Organic Chemicals / Q000378:metabolism*; D010933:Plankton; D012336:RNA, Ribosomal, 16S / Q000235:genetics; D021521:Ribotyping; D012621:Seasons; D017422:Sequence Analysis, DNA
D004275:DNA, Ribosomal; D009930:Organic Chemicals; D012336:RNA, Ribosomal, 16S