title: Mutagenesis of the dimer interface residues of tethered and untethered HIV-1 protease result in differential activity and suggest multiple mechanisms of compensation.
abstract: As is the case for all retroviruses, the protease of HIV-1 is only functional as a homodimer; dimerization of two protease monomers results in the formation of the enzyme active site. This dimer structure is supported primarily by interactions between the first four amino-terminal and the last four carboxy-terminal amino acids. These eight amino acids form a beta-sheet in which hydrophobic residues are oriented towards the core of the molecule and polar residues are directed towards the solvent. Although the structure of the dimer interface has been determined, the forces that support dimerization have not been fully characterized. Here, we describe a tethered construct in which two protease monomers are joined by a 5 amino acid linker. We evaluate the relative role of each dimer interface residue in functional homo- and heterodimers. Our studies indicate that the hydrophobic residues of the dimer interface are particularly important in maintaining enzyme activity and that enzyme activity is more sensitive to substitutions of the C-terminal amino acids. Further, we demonstrate that the presence of the tether is able to compensate for mutations within the dimer interface that inactivate the enzyme.
authors.affiliation: Department of Medicine, UNC School of Medicine, Chapel Hill, NC 27599-7030, USA.
authors.forename: Sumana
authors.initials: S
authors.lastname: Choudhury
authors.forename: Lori
authors.initials: L
authors.lastname: Everitt
authors.forename: Steven C
authors.initials: SC
authors.lastname: Pettit
authors.forename: Andrew H
authors.initials: AH
authors.lastname: Kaplan
mesh_terms: D019943:Amino Acid Substitution; D019281:Dimerization; D016333:HIV Protease / Q000737:chemistry* / Q000378:metabolism; D016296:Mutagenesis; D013329:Structure-Activity Relationship
chemical_list: D016333:HIV Protease