title: Epigenetic changes in pilocytic astrocytomas and medulloblastomas.
abstract: Aberrant methylation of CpG islands located in promoter regions represents one of the major mechanisms for silencing of cancer-related genes in tumour cells. We determined the frequency of aberrant CpG island methylation of several tumour-associated genes: MGMT, GSTP1, DAPK, p14ARF, THBS1, TIMP-3, p73, p16INK4A, RB1 and TP53 in 24 neurogenic tumours consisting of pilocytic astrocytomas (n=13) and medulloblastomas (n=11). The methylation index (number methylated genes/total genes analysed) displayed slight differences (0.18 and 0.25, respectively), and the profile of methylated genes in the two neoplasms was distinct, as predicted. The main differences involved the methylation rate of GSTP1 (0% in pilocytic astrocytomas vs. 18% medulloblastomas) and p14ARF (0% in pilocytic astrocytomas vs. 45% in medulloblastomas) genes. Pilocytic astrocytomas also demonstrated some differences when compared to methylation data from other astrocytic tumours, primarily regarding the MGMT methylation rate. Despite the fact that these differences do not show specific tumour-associated gene methylation patterns, our findings should help us understand the pathogenic mechanisms of both neurogenic neoplasm types.
authors.affiliation: Department of C. Experimental, Laboratorio de Oncogenetica Molecular, Hospital Universitario La Paz, 28046 Madrid, Spain.
authors.forename: Pilar
authors.initials: P
authors.lastname: Gonzalez-Gomez
authors.forename: M Josefa
authors.initials: MJ
authors.lastname: Bello
authors.forename: Jesus
authors.initials: J
authors.lastname: Lomas
authors.forename: Dolores
authors.initials: D
authors.lastname: Arjona
authors.forename: M Eva
authors.initials: ME
authors.lastname: Alonso
authors.forename: Cinthia
authors.initials: C
authors.lastname: Amiñoso
authors.forename: Jose M
authors.initials: JM
authors.lastname: De Campos
authors.forename: Jesus
authors.initials: J
authors.lastname: Vaquero
authors.forename: Jose L
authors.initials: JL
authors.lastname: Sarasa
authors.forename: Cacilda
authors.initials: C
authors.lastname: Casartelli
authors.forename: Juan A
authors.initials: JA
authors.lastname: Rey
mesh_terms: D000293:Adolescent; D000328:Adult; D001254:Astrocytoma / Q000235:genetics* / Q000473:pathology; D001932:Brain Neoplasms / Q000235:genetics* / Q000473:pathology; D002528:Cerebellar Neoplasms / Q000235:genetics* / Q000473:pathology; D002648:Child; D002675:Child, Preschool; D018899:CpG Islands; D019175:DNA Methylation; D005260:Female; D015972:Gene Expression Regulation, Neoplastic; D020868:Gene Silencing; D006801:Humans; D008297:Male; D008527:Medulloblastoma / Q000235:genetics* / Q000473:pathology