title: Normal human dermal fibroblasts: proteomic analysis of cell layer and culture medium.
abstract: Proteins present within the cell layer and those released in the cell medium from in vitro cultured normal human dermal fibroblasts were separated and characterized in terms of their isoelectric point and molecular weight, by two-dimensional (2-D) gel electrophoresis. All spots in the synthetic gel were firstly analyzed by the Melanie 3 software and compared with those of breast cancer cells, colorectal epithelial cells, HL60, lymphoma cells, and platelets, already available on-line. From the identification of 144 spots from both the cell layer and the medium, we were able to recognize 89 different proteins, since a certain number of spots represented different isoforms of the same molecule. Identifications were performed by matching with on-line 2-D databases, and by matrix assisted laser-desorption/ionization-time of flight-mass spectrometry (MALDI-TOF-MS), in order to confirm the identification by matching, or to identify new proteins. The procedure we used allows (i) to design a highly reproducible reference map of the proteome of adult human normal fibroblasts in culture, (ii) to evaluate protein species produced in the cell layer as well as those released in the culture medium, and (iii) to compare data from gel matching with those obtained by MS. This work represents an essential step for a better knowledge of mesenchymal cells, given the widespread use of this cell type in both clinical and experimental investigations.
authors.affiliation: Department of Biomedical Sciences, University of Modena and Reggio Emilia, Italy.
authors.forename: Federica
authors.initials: F
authors.lastname: Boraldi
authors.forename: Luca
authors.initials: L
authors.lastname: Bini
authors.forename: Sabrina
authors.initials: S
authors.lastname: Liberatori
authors.forename: Alessandro
authors.initials: A
authors.lastname: Armini
authors.forename: Vitaliano
authors.initials: V
authors.lastname: Pallini
authors.forename: Roberta
authors.initials: R
authors.lastname: Tiozzo
authors.forename: Ivonne Pasquali
authors.initials: IP
authors.lastname: Ronchetti
authors.forename: Daniela
authors.initials: D
authors.lastname: Quaglino
mesh_terms: D000328:Adult; D018929:Cell Culture Techniques; D016208:Databases, Factual; D015180:Electrophoresis, Gel, Two-Dimensional; D005347:Fibroblasts / Q000737:chemistry*; D006801:Humans; D011506:Proteins / Q000032:analysis / Q000302:isolation & purification* / Q000378:metabolism; D040901:Proteomics / Q000295:instrumentation / Q000379:methods*; D012867:Skin / Q000166:cytology*; D012984:Software; D019032:Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization
chemical_list: D011506:Proteins