title: Molecular subtyping to detect human listeriosis clusters.
abstract: We analyzed the diversity (Simpson's Index, D) and distribution of Listeria monocytogenes in human listeriosis cases in New York State (excluding New York City) from November 1996 to June 2000 by using automated ribotyping and pulsed-field gel electrophoresis (PFGE). We applied a scan statistic (p<or=0.05) to detect listeriosis clusters caused by a specific Listeria monocytogenes subtype. Among 131 human isolates, 34 (D=0.923) ribotypes and 74 (D=0.975) PFGE types were found. Nine (31% of cases) clusters were identified by ribotype or PFGE; five (18% of cases) clusters were identified by using both methods. Two of the nine clusters (13% of cases) corresponded with investigated multistate listeriosis outbreaks. While most human listeriosis cases are considered sporadic, highly discriminatory molecular subtyping approaches thus indicated that 13% to 31% of cases reported in New York State may represent single-source clusters. Listeriosis control and reduction efforts should include broad-based subtyping of human isolates and consider that a large number of cases may represent outbreaks.
authors.affiliation: Wadsworth Center, New York State Department of Health, Albany, New York, USA.
authors.forename: Brian D
authors.initials: BD
authors.lastname: Sauders
authors.forename: Esther D
authors.initials: ED
authors.lastname: Fortes
authors.forename: Dale L
authors.initials: DL
authors.lastname: Morse
authors.forename: Nellie
authors.initials: N
authors.lastname: Dumas
authors.forename: Julia A
authors.initials: JA
authors.lastname: Kiehlbauch
authors.forename: Ynte
authors.initials: Y
authors.lastname: Schukken
authors.forename: Jonathan R
authors.initials: JR
authors.lastname: Hibbs
authors.forename: Martin
authors.initials: M
authors.lastname: Wiedmann
mesh_terms: D000368:Aged; D015373:Bacterial Typing Techniques / Q000379:methods*; D016000:Cluster Analysis; D016521:Electrophoresis, Gel, Pulsed-Field; D005260:Female; D006801:Humans; D007231:Infant, Newborn; D008089:Listeria monocytogenes / Q000145:classification* / Q000302:isolation & purification; D008088:Listeriosis / Q000453:epidemiology* / Q000382:microbiology; D008297:Male; D009518:New York / Q000453:epidemiology; D010802:Phylogeny; D012335:RNA, Ribosomal / Q000032:analysis; D021521:Ribotyping / Q000379:methods* / Q000706:statistics & numerical data
chemical_list: D012335:RNA, Ribosomal