Identification of conserved vault RNA expression elements and a non-expressed mouse vault RNA gene.
Vault RNA (vRNA) genes have been cloned from several vertebrates including rat, mouse, and humans. Their copy numbers vary, as does the length of the encoded RNA. We have determined that the mouse genome contains two vRNA genes; one is expressed the other is a pseudogene. In vitro transcription of the rat vRNA gene by RNA polymerase III has previously been shown to be dependent on a combination of both external and internal promoter sequence elements. By comparing the upstream regions of the vertebrate vRNA genes, a 25 bp conserved sequence and a TATA box can be identified. Furthermore, the unique arrangement of the internal promoter boxes (one A and two B boxes) is conserved in the expressed human vRNA genes even though a new RNA polymerase III termination sequence has evolved between the two B boxes.
Kickhoefer
Valerie A
VA
Department of Biological Chemistry and the Jonsson Comprehensive Cancer Center, 33-131 CHS mail code #173717, The David Geffen School of Medicine at UCLA, 10833 Le Conte Avenue, Los Angeles, CA 90095-1737, USA. vkick@mednet.ucla.edu
Emre
Nil
N
Stephen
Andrew G
AG
Poderycki
Michael J
MJ
Rome
Leonard H
LH
D024506:5' Flanking Region / Q000235:genetics; D000818:Animals; D001483:Base Sequence; D001665:Binding Sites / Q000235:genetics; D015152:Blotting, Northern; D003001:Cloning, Molecular; D017124:Conserved Sequence / Q000235:genetics; D004247:DNA / Q000737:chemistry / Q000235:genetics; D015870:Gene Expression; D008297:Male; D051379:Mice; D008810:Mice, Inbred C57BL; D008815:Mice, Inbred Strains; D008969:Molecular Sequence Data; D011401:Promoter Regions, Genetic / Q000235:genetics; D011544:Pseudogenes / Q000235:genetics*; D012313:RNA / Q000235:genetics / Q000378:metabolism*; D012320:RNA Polymerase III / Q000378:metabolism; D016415:Sequence Alignment; D017422:Sequence Analysis, DNA; D012689:Sequence Homology, Nucleic Acid; D020394:Vault Ribonucleoprotein Particles / Q000235:genetics* / Q000378:metabolism
D020394:Vault Ribonucleoprotein Particles; D012313:RNA; D004247:DNA; D012320:RNA Polymerase III