title: [Development of a PCR-based method for diagnostics of mycoses].
abstract: Since the express-diagnostics of mycoses in immune-deficit patients still remains an acute problem, we developed an effective test system (Kan-Am) to detect DNA Candida albicans, which is a leader in the list of causative agents of candidosis. A comparison study of three PCR-systems used to detect a broad spectrum of fungoid pathogens was carried out, and a universal system (FungAm), which ensures the detection of DNAs of above 78 strains of 25 types of pathogenic fungi, was selected. The results of clinical testing of the species-specific and universal PCR-systems are well confirmed by the culture method, and they are indicative of the efficacy of applying them for the diagnostics of mycoses in neonatology. The use of the mentioned systems is a promising factor for the express-diagnostics of mycoses in immunodeficiency patients. The high sensitivity of the method makes it possible to detect 10 to 100 cells of a causative agent in 100 mcl of the examined biological material, which is compatible with the culture method. A kit of dry reagents (IonoMix) designed for an accelerated sample preparation and isolation, from them, of DNAs on the basis of Chelex-100 and of proteinase K was worked out; the kit is portable and meant for a long-term storing.
authors.affiliation: Engelhardt's Institute for Molecular Biology, Russian Academy of Sciences, Moscow, Russia.
authors.forename: N V
authors.initials: NV
authors.lastname: Ivanova
authors.forename: G M
authors.initials: GM
authors.lastname: Rakhimova
authors.forename: S N
authors.initials: SN
authors.lastname: Shcherbo
authors.forename: G V
authors.initials: GV
authors.lastname: Sterkhova
authors.forename: S V
authors.initials: SV
authors.lastname: Sidorenko
authors.forename: M V
authors.initials: MV
authors.lastname: Degtiareva
authors.forename: G B
authors.initials: GB
authors.lastname: Fadeeva
authors.forename: A B
authors.initials: AB
authors.lastname: Poltaraus
mesh_terms: D001483:Base Sequence; D002176:Candida albicans / Q000235:genetics / Q000302:isolation & purification*; D002177:Candidiasis / Q000175:diagnosis / Q000382:microbiology*; D004271:DNA, Fungal / Q000032:analysis; D021901:DNA, Intergenic / Q000032:analysis; D005260:Female; D006801:Humans; D007223:Infant; D007231:Infant, Newborn; D008969:Molecular Sequence Data; D009181:Mycoses / Q000175:diagnosis*; D009359:Neonatology / Q000379:methods; D016133:Polymerase Chain Reaction / Q000379:methods*; D012680:Sensitivity and Specificity; D013045:Species Specificity
chemical_list: D004271:DNA, Fungal; D021901:DNA, Intergenic