title: Differential proteomic analysis of the mouse retina: the induction of crystallin proteins by retinal degeneration in the rd1 mouse.
abstract: We have applied proteomic analysis to the degeneration of photoreceptors. In the rd1 mouse, a recessive mutation in the PDE6B gene leads to rapid loss of rods through apoptosis. By 5 wk postnatal, virtually all rod photoreceptors have degenerated, leaving one row of cones that degenerates secondarily. In order to assess comparative protein expression, proteins extracted from whole retina were resolved on a two-dimensional gel and identified by mass spectrometry combined with database screening. Matrix-assisted laser desorption/ionization time-of-flight mass spectrometry coupled to peptide mass fingerprinting was sufficient to identify most of the proteins, the remaining being identified with additional sequence information obtained by nano-electrospray ionization tandem mass spectrometry or liquid chromatography tandem mass spectrometry. The study revealed 212 spots, grouped into 109 different proteins. Differential analysis showed loss of proteins involved in the rod-specific phototransduction cascade, as well as induction of proteins from the crystallin family, in response to retinal degeneration. Identification of such pathways may contribute to new therapeutic approaches.
authors.affiliation: Laboratoire de Spectrométrie de Masse Bio-Organique, CNRS UMR 7509, Ecole Européenne de Chimie, Polyméres et Matériaux, 25 rue Becquerel, 67087 Strasbourg Cedex, France.
authors.forename: Nükhet
authors.initials: N
authors.lastname: Cavusoglu
authors.forename: Danièle
authors.initials: D
authors.lastname: Thierse
authors.forename: Saddek
authors.initials: S
authors.lastname: Mohand-Saïd
authors.forename: Frédéric
authors.initials: F
authors.lastname: Chalmel
authors.forename: Olivier
authors.initials: O
authors.lastname: Poch
authors.forename: Alain
authors.initials: A
authors.lastname: Van-Dorsselaer
authors.forename: José-Alain
authors.initials: JA
authors.lastname: Sahel
authors.forename: Thierry
authors.initials: T
authors.lastname: Léveillard
mesh_terms: D000595:Amino Acid Sequence; D000818:Animals; D003459:Crystallins / Q000096:biosynthesis* / Q000235:genetics / Q000302:isolation & purification; D015180:Electrophoresis, Gel, Two-Dimensional; D005808:Genes, Recessive; D051379:Mice; D008809:Mice, Inbred C3H; D008810:Mice, Inbred C57BL; D008817:Mice, Mutant Strains; D008969:Molecular Sequence Data; D020419:Photoreceptor Cells, Vertebrate / Q000378:metabolism; D040901:Proteomics; D012160:Retina / Q000378:metabolism*; D012162:Retinal Degeneration / Q000235:genetics* / Q000378:metabolism*; D021241:Spectrometry, Mass, Electrospray Ionization; D019032:Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization
chemical_list: D003459:Crystallins