title: The PredictProtein server.
abstract: PredictProtein (PP, http://cubic.bioc.columbia.edu/pp/) is an internet service for sequence analysis and the prediction of aspects of protein structure and function. Users submit protein sequence or alignments; the server returns a multiple sequence alignment, PROSITE sequence motifs, low-complexity regions (SEG), ProDom domain assignments, nuclear localisation signals, regions lacking regular structure and predictions of secondary structure, solvent accessibility, globular regions, transmembrane helices, coiled-coil regions, structural switch regions and disulfide-bonds. Upon request, fold recognition by prediction-based threading is available. For all services, users can submit their query either by electronic mail or interactively from World Wide Web.
authors.affiliation: CUBIC, Department of Biochemistry and Molecular Biophysics, Columbia University, 650 West 168th Street BB217, New York, NY 10032, USA. rost@columbia.edu
authors.forename: Burkhard
authors.initials: B
authors.lastname: Rost
authors.forename: Jinfeng
authors.initials: J
authors.lastname: Liu
mesh_terms: D030562:Databases, Protein; D020407:Internet; D017433:Protein Structure, Secondary; D017434:Protein Structure, Tertiary; D011506:Proteins / Q000737:chemistry* / Q000502:physiology; D016415:Sequence Alignment; D020539:Sequence Analysis, Protein / Q000379:methods*; D013997:Time Factors; D014584:User-Computer Interface
chemical_list: D011506:Proteins