title: EUGENE'HOM: A generic similarity-based gene finder using multiple homologous sequences.
abstract: EUGENE'HOM is a gene prediction software for eukaryotic organisms based on comparative analysis. EUGENE'HOM is able to take into account multiple homologous sequences from more or less closely related organisms. It integrates the results of TBLASTX analysis, splice site and start codon prediction and a robust coding/non-coding probabilistic model which allows EUGENE'HOM to handle sequences from a variety of organisms. The current target of EUGENE'HOM is plant sequences. The EUGENE'HOM web site is available at http://genopole.toulouse.inra.fr/bioinfo/eugene/EuGeneHom/cgi-bin/EuGeneHom.pl.
authors.affiliation: Laboratoire de Biométrie et Intelligence Artificielle, INRA, 31326, Castanet Tolosan Cedex, France. foissac@toulouse.inra.fr
authors.forename: Sylvain
authors.initials: S
authors.lastname: Foissac
authors.forename: Philippe
authors.initials: P
authors.lastname: Bardou
authors.forename: Annick
authors.initials: A
authors.lastname: Moisan
authors.forename: Marie-Josée
authors.initials: MJ
authors.lastname: Cros
authors.forename: Thomas
authors.initials: T
authors.lastname: Schiex
mesh_terms: D000465:Algorithms; D018387:Codon, Initiator; D003196:Computer Graphics; D018076:DNA, Complementary / Q000737:chemistry; D018744:DNA, Plant / Q000032:analysis; D005057:Eukaryotic Cells; D005796:Genes; D016678:Genome; D020407:Internet; D022821:RNA Splice Sites; D017422:Sequence Analysis, DNA / Q000379:methods*; D012689:Sequence Homology, Nucleic Acid; D012984:Software; D014584:User-Computer Interface
chemical_list: D018387:Codon, Initiator; D018076:DNA, Complementary; D018744:DNA, Plant; D022821:RNA Splice Sites