title: PCR assay of the groEL gene for detection and differentiation of Bacillus cereus group cells.
abstract: Strains of species in the Bacillus cereus group are potentially enterotoxic. Thus, the detection of all B. cereus group strains is important. As 16S ribosomal DNA sequence analysis cannot adequately differentiate species of the B. cereus group, we explored the potential of the groEL gene as a phylogenetic marker. A phylogenetic analysis of the groEL sequences of 78 B. cereus group strains revealed that the B. cereus group strains were split into two major clusters, one including six B. mycoides and one B. pseudomycoides (cluster II) and the other including two B. mycoides and the rest of the B. cereus group strains (cluster I). Cluster I was further differentiated into two subclusters, Ia and Ib. The sodA gene sequences of representative strains from different clusters were also compared. The phylogenetic tree constructed from the sodA sequences showed substantial similarity to the tree constructed from the groEL sequences. Based on the groEL sequences, a PCR assay for detection and identification of B. cereus group strains was developed. Subsequent restriction fragment length polymorphism (RFLP) analysis verified the PCR amplicons and the differentiation of the B. cereus group strains. RFLP with MboI was identical for all the B. cereus group strains analyzed, while RFLP with MfeI or PstI classified all B. cereus and B. thuringiensis strains into two groups. All cluster II B. mycoides and B. pseudomycoides strains could be discriminated from other B. cereus group bacteria by restriction analysis with TspRI.
authors.affiliation: Division of Bacteriology, Institute of Preventive Medicine, National Defense Medical Center, Sanhsia, Taipei, Taiwan 237, Republic of China.
authors.forename: Yu-Hsiu
authors.initials: YH
authors.lastname: Chang
authors.forename: Yung-Hui
authors.initials: YH
authors.lastname: Shangkuan
authors.forename: Hung-Chi
authors.initials: HC
authors.lastname: Lin
authors.forename: Hwan-Wun
authors.initials: HW
authors.lastname: Liu
mesh_terms: D001409:Bacillus cereus / Q000145:classification / Q000235:genetics / Q000302:isolation & purification*; D018834:Chaperonin 60 / Q000235:genetics*; D010802:Phylogeny; D016133:Polymerase Chain Reaction / Q000379:methods*; D012150:Polymorphism, Restriction Fragment Length; D012336:RNA, Ribosomal, 16S / Q000235:genetics
chemical_list: D018834:Chaperonin 60; D012336:RNA, Ribosomal, 16S