title: Genomic structure and 5'-flanking sequences of rat N-acetylglucosaminyltransferase I gene and regulatory role of its transcriptional diversity.
abstract: It has been known that mouse, rat, and human N-acetylglucosaminyltransferase I (GnT-I) genes produce at least two transcripts, which differ in their 5'-untranslated region (5'-UTR) length, and the longer transcript is preferentially expressed in brains. However, the physiological meaning of this brain-specific expression pattern was unknown. We cloned the rat GnT-I gene and analyzed its structure. It consisted of five exons, and four of them coded only 5'-UTRs. A putative NF-kappaB binding site was found in the 5'-flanking sequence for the transcript that was previously shown to be induced by inflammation. The unusually long 5'-UTR of the major GnT-I transcript in rat brain was shown to inhibit protein production from the following coding sequence in COS7 cells. Comparison of the GnT-I protein/mRNA ratio in rat brain and liver showed that GnT-I mRNA in the brain was translated 3.8-times less efficiently than in the liver. Implications are discussed of these results in regulation of GnT-I expression in rat brain.
authors.affiliation: Laboratory of Applied Molecular Biology, Division of Applied Biochemistry, Graduate School of Agriculture and Biological Sciences, Osaka Prefecture University, Sakai, Japan. tfukada@biochem.osakafu-u.ac.jp
authors.forename: Takashi
authors.initials: T
authors.lastname: Fukada
authors.forename: Masanobu
authors.initials: M
authors.lastname: Ono
authors.forename: Shohei
authors.initials: S
authors.lastname: Sakata
authors.forename: Noriyuki
authors.initials: N
authors.lastname: Kioka
authors.forename: Hiroshi
authors.initials: H
authors.lastname: Sakai
authors.forename: Tohru
authors.initials: T
authors.lastname: Komano
mesh_terms: D024506:5' Flanking Region / Q000235:genetics*; D000818:Animals; D001483:Base Sequence; D001921:Brain / Q000201:enzymology / Q000378:metabolism; D019556:COS Cells; D005091:Exons / Q000235:genetics; D015971:Gene Expression Regulation, Enzymologic; D008099:Liver / Q000201:enzymology / Q000378:metabolism; D008969:Molecular Sequence Data; D017351:N-Acetylglucosaminyltransferases / Q000096:biosynthesis / Q000235:genetics*; D012333:RNA, Messenger / Q000235:genetics / Q000378:metabolism; D051381:Rats; D017208:Rats, Wistar; D024363:Transcription Initiation Site; D014158:Transcription, Genetic
chemical_list: D012333:RNA, Messenger; D017351:N-Acetylglucosaminyltransferases