title: Cytochrome p450 complement (CYPome) of the avermectin-producer Streptomyces avermitilis and comparison to that of Streptomyces coelicolor A3(2).
abstract: The genus Streptomyces produces about two-thirds of naturally occurring antibiotics and a wide array of other secondary metabolites, including antihelminthic agents, antitumor agents, antifungal agents, and herbicides. The newly completed genome sequence of the avermectin-producing bacterium Streptomyces avermitilis contains 33 cytochromes p450 (CYPs), many more than the 18 observed in Streptomyces coelicolor A3(2). Some of the likely metabolic functions are reported together with their genomic location and bioinformatic analysis. Seven entirely new CYP families were found together with close homologues of some forms observed in S. coelicolor A3(2). The presence of unusual CYP forms associated with conservons is revealed and of these, CYP157 forms in both S. avermitilis and S. coelicolor A3(2) deviate from the previously accepted rule for an EXXR motif within the K-helix of CYPs. Amongst this range of CYPs are forms associated with avermectin, filipin, geosmin, and pentalenolactone biosynthesis as well as unknown pathways of secondary metabolism.
authors.affiliation: Institute of Biological Sciences, University of Wales Aberystwyth, Aberystwyth, UK. dcl@aber.ac.uk
authors.forename: David C
authors.initials: DC
authors.lastname: Lamb
authors.forename: Haruo
authors.initials: H
authors.lastname: Ikeda
authors.forename: David R
authors.initials: DR
authors.lastname: Nelson
authors.forename: Jun
authors.initials: J
authors.lastname: Ishikawa
authors.forename: Tove
authors.initials: T
authors.lastname: Skaug
authors.forename: Colin
authors.initials: C
authors.lastname: Jackson
authors.forename: Satoshi
authors.initials: S
authors.lastname: Omura
authors.forename: Michael R
authors.initials: MR
authors.lastname: Waterman
authors.forename: Steven L
authors.initials: SL
authors.lastname: Kelly
mesh_terms: D015825:Chromosomes, Fungal; D003165:Complement System Proteins; D003577:Cytochrome P-450 Enzyme System / Q000145:classification / Q000235:genetics*; D016681:Genome, Fungal; D007559:Ivermectin / Q000031:analogs & derivatives* / Q000378:metabolism; D010802:Phylogeny; D013302:Streptomyces / Q000201:enzymology* / Q000235:genetics / Q000378:metabolism
chemical_list: D007559:Ivermectin; C019264:avermectin; D003165:Complement System Proteins; D003577:Cytochrome P-450 Enzyme System