RankGene: identification of diagnostic genes based on expression data.
RankGene is a program for analyzing gene expression data and computing diagnostic genes based on their predictive power in distinguishing between different types of samples. The program integrates into one system a variety of popular ranking criteria, ranging from the traditional t-statistic to one-dimensional support vector machines. This flexibility makes RankGene a useful tool in gene expression analysis and feature selection.
Su
Yang
Y
Bioinformatics Program, Boston University, Boston, MA 02215, USA.
Murali
T M
TM
Pavlovic
Vladimir
V
Schaffer
Michael
M
Kasif
Simon
S
D000465:Algorithms; D004247:DNA / Q000145:classification; D003936:Diagnosis, Computer-Assisted / Q000379:methods*; D020869:Gene Expression Profiling / Q000379:methods*; D005786:Gene Expression Regulation / Q000235:genetics*; D005819:Genetic Markers / Q000235:genetics*; D020022:Genetic Predisposition to Disease / Q000145:classification / Q000235:genetics; D005820:Genetic Testing / Q000379:methods*; D008957:Models, Genetic; D015233:Models, Statistical; D012984:Software; D014584:User-Computer Interface
D005819:Genetic Markers; D004247:DNA