Low-frequency modes of peptides and globular proteins in solution observed by ultrafast OHD-RIKES spectroscopy.
The low-frequency (1-200 cm(-1)) vibrational spectra of peptides and proteins in solution have been investigated with ultrafast optical heterodyne-detected Raman-induced Kerr-effect spectroscopy (OHD-RIKES). Spectra have been obtained for di-L-alanine (ALA(2)) and the alpha-helical peptide poly-L-alanine (PLA) in dichloroacetic acid solution. The poly-L-alanine spectrum shows extra amplitude compared to the di-L-alanine spectrum, which can be explained by the secondary structure of the former. The globular proteins lysozyme, alpha-lactalbumin, pepsin, and beta-lactoglobulin in aqueous solution have been studied to determine the possible influence of secondary or tertiary structure on the low-frequency spectra. The spectra of the globular proteins have been analyzed in terms of three nondiffusive Brownian oscillators. The lowest frequency oscillator corresponds to the so-called Boson peak observed in inelastic neutron scattering (INS). The remaining two oscillators are not observed in inelastic neutron scattering, do therefore not involve significant motion of hydrogen atoms, and may be associated with delocalized backbone torsions.
Giraud
Gerard
G
Department of Physics, University of Strathclyde, Glasgow G4 0NG, Scotland, United Kingdom.
Karolin
Jan
J
Wynne
Klaas
K
D000409:Alanine / Q000737:chemistry; D000818:Animals; D055592:Biophysical Phenomena; D001703:Biophysics; D003999:Dichloroacetic Acid / Q000737:chemistry; D006859:Hydrogen; D007768:Lactalbumin / Q000737:chemistry; D007782:Lactoglobulins / Q000737:chemistry; D009113:Muramidase / Q000737:chemistry; D009502:Neutrons; D010434:Pepsin A / Q000737:chemistry; D010455:Peptides / Q000737:chemistry*; D017510:Protein Folding; D017433:Protein Structure, Secondary; D017434:Protein Structure, Tertiary; D011506:Proteins / Q000737:chemistry*; D012542:Scattering, Radiation; D013059:Spectrum Analysis, Raman / Q000379:methods*; D013997:Time Factors
D007782:Lactoglobulins; D010455:Peptides; D011506:Proteins; C019529:polyalanine; D006859:Hydrogen; D007768:Lactalbumin; D003999:Dichloroacetic Acid; D009113:Muramidase; D010434:Pepsin A; D000409:Alanine