title: [Molecular characterization and biodiversity of Mycobacterium tuberculosis in the Antilles-Guiana region and comparative analysis in a metropolitan region, Aquitaine].
abstract: Tuberculosis is a highly contagious infectious disease in recrudescence whose epidemiologic monitoring is reinforced by molecular biology. In this context, we were particularly interested in the cases of tuberculosis of French West Indies and French Guiana (FWI-FG). This study covered a period of two years (1997 and 1998) and focused on the demographical and epidemiological characteristics of the cases diagnosed by an analysis of their genotypes. Our results were confronted with a French metropolitan area (Aquitaine) with similar demographic background. Moreover, Aquitaine area has privileged links with FWI-FG region and also has a similar network for monitoring tuberculosis as ours. So we used a PCR method called spoligotyping as a first line method to optimize the alternative IS6110-RFLP method which remains cumbersome. A total of 105 strains of FWI-FG and 172 strains of Aquitaine were typed by spoligotyping and by the standard IS6110-RFLP method. The results of the first grouping by spoligotyping were analyzed in comparison with IS6110-RFLP. The results obtained showed a rate of recent transmission of tuberculosis being 34.3% in FWI-FG and 10.5% in Aquitaine. These observations underlined a high degree of polymorphism in the Aquitaine region as compared to the FWI-FG region. Thanks to the various profiles obtained by spoligotyping, we could study their distribution in the three areas and highlight common types like type 53, 50 and 42 and types found locally like the types 33 and 14 found respectively in Aquitaine and FWI as well as endemic types like type 76 found only in FG. These results are discussed in the context of the evolution of clinical isolates of tubercle bacilli with time.
authors.affiliation: Unité de la tuberculose et des mycobactéries, institut Pasteur de Guadeloupe, Morne Jolivière, BP484, 97165 Pointe-à-Pitre, France.
authors.forename: K
authors.initials: K
authors.lastname: Brudey
authors.forename: I
authors.initials: I
authors.lastname: Filliol
authors.forename: C
authors.initials: C
authors.lastname: Sola
authors.forename: C
authors.initials: C
authors.lastname: Bébéar
authors.forename: S
authors.initials: S
authors.lastname: Elia-Pasquet
authors.forename: J
authors.initials: J
authors.lastname: Texier-Maugein
authors.forename: N
authors.initials: N
authors.lastname: Rastogi
mesh_terms: D044822:Biodiversity; D005602:France / Q000453:epidemiology; D005616:French Guiana / Q000453:epidemiology; D005838:Genotype; D006801:Humans; D009169:Mycobacterium tuberculosis / Q000145:classification / Q000235:genetics* / Q000302:isolation & purification; D016133:Polymerase Chain Reaction; D012150:Polymorphism, Restriction Fragment Length; D014376:Tuberculosis / Q000453:epidemiology / Q000382:microbiology; D014900:West Indies / Q000453:epidemiology