title: Methylophaga natronica sp. nov., a new alkaliphilic and moderately halophilic, restricted-facultatively methylotrophic bacterium from soda lake of the Southern Transbaikal region.
abstract: A new, moderately haloalkaliphilic and restricted-facultatively methylotrophic bacterium (strain Bur2T) with the ribulose monophosphate pathway of carbon assimilation is described. The isolate, which utilizes methanol, methylamine and fructose, is an aerobic, Gram-negative, asporogenous, motile short rod multiplying by binary fission. It is auxotrophic for vitamin B12, and requires NaHCO3 or NaCl for growth in alkaline medium. Cellular fatty acids profile consists primarily of straight-chain saturated C16:0, unsaturated C16:1 and C18:1 acids. The major ubiquinone is Q-8. The dominant phospholipids are phosphatidylethanolamine and phosphatidylglycerol. Diphosphatidylglycerol is also present. Optimal growth conditions are 25-29 degrees C, pH 8.5-9.0 and 2-3% (w/v) NaCl. Cells accumulate ectoine and glutamate as the main osmoprotectants. The G + C content of the DNA is 45.0 mol%. Based on 16S rDNA sequence analysis and DNA-DNA relatedness (25-35%) with type strains of marine and soda lake methylobacteria belonging to the genus Methylophaga, the novel isolate was classified as a new species of this genus and named Methylophaga natronica (VKM B-2288T).
authors.affiliation: G.K. Skryabin Institute of Biochemistry and Physiology of Microorganisms, Russian Academy of Sciences, Pushchino, Russia.
authors.forename: Nina
authors.initials: N
authors.lastname: Doronina
authors.forename: Tsyregma
authors.initials: T
authors.lastname: Darmaeva
authors.forename: Yuri
authors.initials: Y
authors.lastname: Trotsenko
mesh_terms: D000332:Aerobiosis; D001482:Base Composition; D001483:Base Sequence; D004269:DNA, Bacterial / Q000737:chemistry / Q000235:genetics / Q000302:isolation & purification; D005227:Fatty Acids / Q000032:analysis; D005618:Fresh Water / Q000382:microbiology*; D005632:Fructose / Q000378:metabolism; D005840:Gentian Violet; D006863:Hydrogen-Ion Concentration; D008055:Lipids / Q000032:analysis; D000432:Methanol / Q000378:metabolism; D008744:Methylamines / Q000378:metabolism; D008969:Molecular Sequence Data; D009068:Movement; D010619:Phenazines; D010802:Phylogeny; D044147:Piscirickettsiaceae / Q000145:classification* / Q000166:cytology / Q000302:isolation & purification* / Q000502:physiology; D011809:Quinones / Q000032:analysis; D012336:RNA, Ribosomal, 16S / Q000737:chemistry / Q000235:genetics; D012274:Ribulosephosphates / Q000378:metabolism; D012426:Russia; D012965:Sodium Chloride / Q000378:metabolism; D013696:Temperature; D014805:Vitamin B 12 / Q000096:biosynthesis; D014871:Water Microbiology
chemical_list: D004269:DNA, Bacterial; D005227:Fatty Acids; C035863:Gram's stain; D008055:Lipids; D008744:Methylamines; D010619:Phenazines; D011809:Quinones; D012336:RNA, Ribosomal, 16S; D012274:Ribulosephosphates; D005632:Fructose; D012965:Sodium Chloride; C027451:methylamine; D005840:Gentian Violet; D014805:Vitamin B 12; D000432:Methanol