title: Competition between interchain and intrachain phase segregation.
abstract: Single-molecule observations of giant DNA have clarified that individual molecules undergo a marked discrete transition between an elongated coil state and a compact globule state. There is a relatively wide region of coexistence between the coil and the globule states, i.e., interchain phase segregation, with a change in intensive variables such as the concentration of the condensing agent, salt concentration, temperature. Very recently, the coexistence of coil and globule conformations within a single long DNA chain, i.e., intrachain phase segregation, has been reported under certain experimental conditions. In this study, we investigated general conditions for intrachain phase segregation in a single polyelectrolyte molecule, based on a simple statistical model. We consider the contribution of condensed counterions and the interaction energy of a charged coiled region. Intrachain phase segregation is stable with regard to free energy within a suitable parameter region. Our results suggest that intrachain phase segregation occurs when the electrostatic screening effect by the salt solution is negligible or when the screening effect is large and there is attractive interaction between polyelectrolyte segments.
authors.affiliation: Department of Physics, Graduate School of Science, Kyoto University, Kyoto 606-8502, Japan.
authors.forename: T
authors.initials: T
authors.lastname: Iwaki
authors.forename: K
authors.initials: K
authors.lastname: Yoshikawa
mesh_terms: D055592:Biophysical Phenomena; D001703:Biophysics; D004247:DNA / Q000737:chemistry*; D004573:Electrolytes / Q000737:chemistry; D009690:Nucleic Acid Conformation
chemical_list: D004573:Electrolytes; D004247:DNA