title: Engineering peroxidase activity in myoglobin: the haem cavity structure and peroxide activation in the T67R/S92D mutant and its derivative reconstituted with protohaemin-l-histidine.
abstract: Atomic co-ordinates and structure factors for the T67R/S92D metMbCN mutant have been deposited with the Protein Data Bank, under accession codes 1h1x and r1h1xsf, respectively. Protein engineering and cofactor replacement have been employed as tools to introduce/modulate peroxidase activity in sperm whale Mb (myoglobin). Based on the rationale that haem peroxidase active sites are characterized by specific charged residues, the Mb haem crevice has been modified to host a haem-distalpropionate Arg residue and a proximal Asp, yielding the T67R/S92D Mb mutant. To code extra conformational mobility around the haem, and to increase the peroxidase catalytic efficiency, the T67R/S92D Mb mutant has been subsequently reconstituted with protohaem-L-histidine methyl ester, yielding a stable derivative, T67R/S92D Mb-H. The crystal structure of T67R/S92D cyano-metMb (1.4 A resolution; R factor, 0.12) highlights a regular haem-cyanide binding mode, and the role for the mutated residues in affecting the haem propionates as well as the neighbouring water structure. The conformational disorder of the haem propionate-7 is evidenced by the NMR spectrum of the mutant. Ligand-binding studies show that the iron(III) centres of T67R/S92D Mb, and especially of T67R/S92D Mb-H, exhibit higher affinity for azide and imidazole than wild-type Mb. In addition, both protein derivatives react faster than wild-type Mb with hydrogen peroxide, showing higher peroxidase-like activity towards phenolic substrates. The catalytic efficiency of T67R/S92D Mb-H in these reactions is the highest so far reported for Mb derivatives. A model for the protein-substrate interaction is deduced based on the crystal structure and on the NMR spectra of protein-phenol complexes.
authors.affiliation: Dipartimento di Chimica Generale, Università di Pavia, Via Taramelli 12, 27100 Pavia, Italy.
authors.forename: Raffaella
authors.initials: R
authors.lastname: Roncone
authors.forename: Enrico
authors.initials: E
authors.lastname: Monzani
authors.forename: Monica
authors.initials: M
authors.lastname: Murtas
authors.forename: Giuseppe
authors.initials: G
authors.lastname: Battaini
authors.forename: Andrea
authors.initials: A
authors.lastname: Pennati
authors.forename: Anna Maria
authors.initials: AM
authors.lastname: Sanangelantoni
authors.forename: Simone
authors.initials: S
authors.lastname: Zuccotti
authors.forename: Martino
authors.initials: M
authors.lastname: Bolognesi
authors.forename: Luigi
authors.initials: L
authors.lastname: Casella
mesh_terms: D000818:Animals; D018360:Crystallography, X-Ray; D004789:Enzyme Activation / Q000235:genetics; D005290:Ferric Compounds / Q000737:chemistry; D005296:Ferrous Compounds / Q000737:chemistry; D006418:Heme / Q000737:chemistry / Q000235:genetics*; D006427:Hemin / Q000031:analogs & derivatives / Q000737:chemistry / Q000235:genetics*; D006639:Histidine / Q000737:chemistry / Q000235:genetics*; D007700:Kinetics; D016297:Mutagenesis, Site-Directed; D009211:Myoglobin / Q000031:analogs & derivatives / Q000737:chemistry / Q000235:genetics*; D019906:Nuclear Magnetic Resonance, Biomolecular; D010544:Peroxidases / Q000737:chemistry / Q000235:genetics*; D015202:Protein Engineering / Q000379:methods; D014907:Whales / Q000235:genetics
chemical_list: D005290:Ferric Compounds; D005296:Ferrous Compounds; D009211:Myoglobin; D006418:Heme; D006639:Histidine; D006427:Hemin; D010544:Peroxidases