Meta and pooled analysis of European coeliac disease data.
Four full genome scans have been carried out by the partners of the European cluster on coeliac disease as well as follow-up studies of candidate regions. No region outside HLA showed significant linkage to the disease in any single study. We first applied a meta-analysis based on a modification of Genome Screen Meta-Analysis to take into account the different linkage statistics, the arbitrariness of bin cutoff points, as well as the sample size of each study. We then performed a pooled linkage analysis of all families and raw genotypes. Besides the HLA region, already known to harbour a risk factor for coeliac disease, both approaches leave very little doubt on the presence of a genetic risk factor in the 5q31-33 region. This region was suggested by several individual studies, but did not reach statistical values high enough to be conclusive when data sets were analysed separately.
1INSERM U535, Villejuif, France. babron@vjf.inserm.fr
Marie-Claude
MC
Babron
Staffan
S
Nilsson
Svetlana
S
Adamovic
Asa Torinsson
AT
Naluai
Jan
J
Wahlström
Henry
H
Ascher
Paul J
PJ
Ciclitira
Ludvig M
LM
Sollid
Jukka
J
Partanen
Luigi
L
Greco
Françoise
F
Clerget-Darpoux
D002446:Celiac Disease / Q000208:ethnology / Q000235:genetics*; D002874:Chromosome Mapping; D003198:Computer Simulation; D005060:Europe; D008040:Genetic Linkage; D005819:Genetic Markers; D020022:Genetic Predisposition to Disease; D015894:Genome, Human; D006680:HLA Antigens / Q000235:genetics; D006801:Humans; D008126:Lod Score; D015201:Meta-Analysis as Topic
D005819:Genetic Markers; D006680:HLA Antigens