Rampant horizontal gene transfer and phospho-donor change in the evolution of the phosphofructokinase.
Previous work on the evolution of the phosphofructokinase (PFK) has shown that this key regulatory enzyme of glycolysis has undergone an intricate evolutionary history. Here, we have used a comprehensive data set to address the taxonomic distribution of the different types of PFK (ATP-dependent and PPi-dependent ones) and to estimate the frequency of horizontal gene transfer (HGT) events. Numerous HGT events appear to have occurred. In addition, we focused on the analysis of sites 104 and 124 (usually Gly(104)+Gly(124) or Asp(104)+Lys(124)), known to be involved in catalysis (J. Biol. Chem. 275 (2000) 35677). It revealed the existence of numerous sequences from distantly related species carrying atypical combinations of amino acids. Several adaptive changes of phospho-donors, probably requiring a single mutation at position 104, have likely occurred independently in many lineages. The analysis of this gene suggests the existence of a high rate of both HGT and substitution in its active sites. These rampant HGT events and flexibility in phospho-donor use illustrate the importance of tinkering in molecular evolution.
Bapteste
Eric
E
Equipe Phylogénie, Bioinformatique et Génome, UMR CNRS 7622, Université Pierre et Marie Curie, 9 quai St. Bernard, 75005 Paris, France. eric.bapteste@snv.jussieu.fr
Moreira
David
D
Philippe
Hervé
H
D000818:Animals; D019143:Evolution, Molecular; D022761:Gene Transfer, Horizontal / Q000235:genetics*; D006801:Humans; D025221:Phosphofructokinases / Q000235:genetics*; D010802:Phylogeny
D025221:Phosphofructokinases