BLAST++: BLASTing queries in batches.
BLAST++ is a tool that is integrated with NCBI BLAST, allowing multiple, say K, queries to be searched against a database concurrently. The results obtained by BLAST++ are identical to that obtained by executing BLAST on each of the K queries, but BLAST++ completes the processing in a much shorter time.


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http://xena1.ddns.comp.nus.edu.sg/~genesis/blast++


BACKGROUND
http://xena1.ddns.comp.nus.edu.sg/~genesis/blast++
Wang
Hao
H
Department of Computer Science, National University of Singapore, 3 Science Drive 2, Singapore 117543.
Ooi
Beng Chin
BC
Tan
Kian-Lee
KL
Ong
Twee-Hee
TH
Zhou
Lei
L
D000465:Algorithms; D003628:Database Management Systems; D030541:Databases, Genetic; D016247:Information Storage and Retrieval / Q000379:methods*; D009317:National Library of Medicine (U.S.); D016415:Sequence Alignment / Q000379:methods*; D017422:Sequence Analysis, DNA / Q000379:methods*; D012984:Software; D014481:United States