odd-skipped homologs function during gut development in C. elegans.
Genes in the odd-skipped (odd) family encode a discrete subset of C2H2 zinc finger proteins that are widely distributed among metazoan phyla. Although the initial member (odd) was identified as a Drosophila pair-rule gene, various homologs are expressed within each of the three germ layers in complex patterns that suggest roles in many pathways beyond segmentation. To further investigate the evolutionary history and extant functions of genes in this family, we have initiated a characterization of two homologs, odd-1 and odd-2, identified in the genome of the nematode, Caenorhabditis elegans. Sequence comparisons with homologs from insects (Drosophila and Anopheles) and mammals suggest that two paralogs were present within an ancestral metazoan; additional insect paralogs and both extant mammalian genes likely resulted from gene duplications that occurred after the split between the arthropods and chordates. Analyses of gene function using RNAi indicate that odd-1 and odd-2 play essential and distinct roles during gut development. Specific expression of both genes in the developing intestine and other cells in the vicinity of the gut was shown using GFP-reporters. These results indicate primary functions for both genes that are most like those of the Drosophila paralogs bowel and drumstick, and support a model in which gut specification represents the ancestral role for genes in this family.
Buckley
Martin S
MS
Department of Biology, Saint Louis University, MO 63103-2010, USA.
Chau
Johnnie
J
Hoppe
Pamela E
PE
Coulter
Douglas E
DE
D000595:Amino Acid Sequence; D000818:Animals; D017173:Caenorhabditis elegans / Q000196:embryology* / Q000235:genetics / Q000378:metabolism; D029742:Caenorhabditis elegans Proteins / Q000737:chemistry / Q000235:genetics / Q000378:metabolism*; D017124:Conserved Sequence / Q000235:genetics; D005753:Gastric Mucosa / Q000378:metabolism; D017238:Genes, Helminth / Q000235:genetics; D008969:Molecular Sequence Data; D010802:Phylogeny; D034622:RNA Interference; D012097:Repressor Proteins / Q000737:chemistry / Q000235:genetics / Q000378:metabolism*; D017385:Sequence Homology; D013270:Stomach / Q000196:embryology*; D016335:Zinc Fingers
D029742:Caenorhabditis elegans Proteins; C487490:Odd-1 protein, C elegans; C487491:Odd-2 protein, C elegans; D012097:Repressor Proteins