title: Distinct patterns of gene expression in the skin lesions of atopic dermatitis and psoriasis: a gene microarray analysis.
abstract: BACKGROUND
  Atopic dermatitis (AD) and psoriasis are the two most common chronic inflammatory skin diseases. Both of these diseases have distinct clinical findings and specific inflammatory cell infiltrates. Previous reports have focused individually on one or two genes or gene products in the lesions of both skin diseases. However, they have not captured the complex gene expression that must occur to induce specific cellular infiltrates in the skin lesions of these two diseases. DNA microarray studies allow the simultaneous comparison of thousands of messenger RNAs that may identify the disease-specific pattern of tissue inflammatory responses.
  
  
  OBJECTIVE
  To compare the complex gene expression pattern of AD versus psoriasis skin lesions.
  
  
  METHODS
  RNA was extracted from skin biopsy specimens of 6 patients with AD and 7 patients with psoriasis and analyzed with the use of Hu-U95Av.GeneChip microarrays. To confirm GeneChip results, real-time PCR of selected genes were performed.
  
  
  RESULTS
  In AD skin, a total of 18 genes including the CC chemokines, CCL-13/MCP-4, CCL-18/PARC, and CCL-27/CTACK showed a statistically significant, >2-fold increase of gene expression compared with psoriasis. In psoriasis skin, a total of 62 genes including CCL-4/MIP-1beta, CCL-20/MIP-3alpha, CXCL-2/GRO-beta CXCL-8/IL-8, and CXCR2/IL-8R showed a >2-fold increase of gene expression compared with AD skin. Real-time PCR confirmed several of these GeneChip results.
  
  
  CONCLUSIONS
  These results show a very distinctive gene expression pattern in AD as compared with psoriasis that may explain several features of AD and psoriasis including the specific inflammatory cell infiltrates observed in these disorders, that is, T(H)2 cells, eosinophils, and mast cells in AD and T(H)1 cells and neutrophils in psoriasis. Such observations may contribute to a characteristic "signature" for these two skin diseases.
authors.affiliation: Department Pediatrics, National Jewish Medical and Research Center, Denver, CO 80206, USA.
authors.forename: Ichiro
authors.initials: I
authors.lastname: Nomura
authors.forename: Bifeng
authors.initials: B
authors.lastname: Gao
authors.forename: Mark
authors.initials: M
authors.lastname: Boguniewicz
authors.forename: Marc A
authors.initials: MA
authors.lastname: Darst
authors.forename: Jeffrey B
authors.initials: JB
authors.lastname: Travers
authors.forename: Donald Y m
authors.initials: DY
authors.lastname: Leung
mesh_terms: D000328:Adult; D001706:Biopsy; D019742:Chemokines, CC / Q000235:genetics / Q000378:metabolism; D019743:Chemokines, CXC / Q000235:genetics / Q000378:metabolism; D003876:Dermatitis, Atopic / Q000378:metabolism / Q000503:physiopathology*; D020869:Gene Expression Profiling; D006801:Humans; D020411:Oligonucleotide Array Sequence Analysis; D011506:Proteins / Q000235:genetics / Q000378:metabolism; D011565:Psoriasis / Q000378:metabolism / Q000503:physiopathology*; D012333:RNA, Messenger / Q000235:genetics / Q000378:metabolism*; D020133:Reverse Transcriptase Polymerase Chain Reaction; D012867:Skin / Q000378:metabolism*
chemical_list: D019742:Chemokines, CC; D019743:Chemokines, CXC; D011506:Proteins; D012333:RNA, Messenger