title: Detection of quantitative trait loci for growth and carcass composition in cattle.
abstract: The objective of the present study was to detect quantitative trait loci for economically important traits in a family from a Bos indicus x Bos taurus sire. A Brahman x Hereford sire was used to develop a half-sib family (n = 547). The sire was mated to Bos taurus cows. Traits analyzed were birth (kg) and weaning weights (kg); hot carcass weight (kg); marbling score; longissimus area (cm2); USDA yield grade; estimated kidney, pelvic, and heart fat (%); fat thickness (cm); fat yield (%); and retail product yield (%). Meat tenderness was measured as Warner-Bratzler shear force (kg) at 3 and 14 d postmortem. Two hundred and thirty-eight markers were genotyped in 185 offspring. One hundred and thirty markers were used to genotype the remaining 362 offspring. A total of 312 markers were used in the final analysis. Seventy-four markers were common to both groups. Significant QTL (expected number of false-positives < 0.05) were observed for birth weight and longissimus area on chromosome 5, for longissimus area on chromosome 6, for retail product yield on chromosome 9, for birth weight on chromosome 21, and for marbling score on chromosome 23. Evidence suggesting (expected number of false-positives < 1) the presence of QTL was detected for several traits. Putative QTL for birth weight were detected on chromosomes 1, 2, and 3, and for weaning weight on chromosome 29. For hot carcass weight, QTL were detected on chromosomes 10, 18, and 29. Four QTL for yield grade were identified on chromosomes 2, 11, 14, and 19. Three QTL for fat thickness were detected on chromosomes 2, 3, 7, and 14. For marbling score, QTL were identified on chromosomes 3, 10, 14, and 27. Four QTL were identified for retail product yield on chromosomes 12, 18, 19, and 29. A QTL for estimated kidney, pelvic, and heart fat was detected on chromosome 15, and a QTL for meat tenderness measured as Warner-Bratzler shear force at 3 d postmortem was identified on chromosome 20. Two QTL were detected for meat tenderness measured as Warner-Bratzler shear force at 14 d postmortem on chromosomes 20 and 29. These results present a complete scan in all available progeny in this family. Regions underlying QTL need to be assessed in other populations.
authors.affiliation: U.S. Meat Animal Research Center, USDA, ARS, Clay Center, NE 68933-0166, USA. casas@email.marc.usda.gov
authors.forename: E
authors.initials: E
authors.lastname: Casas
authors.forename: S D
authors.initials: SD
authors.lastname: Shackelford
authors.forename: J W
authors.initials: JW
authors.lastname: Keele
authors.forename: M
authors.initials: M
authors.lastname: Koohmaraie
authors.forename: T P L
authors.initials: TP
authors.lastname: Smith
authors.forename: R T
authors.initials: RT
authors.lastname: Stone
mesh_terms: D000818:Animals; D001724:Birth Weight / Q000235:genetics; D001823:Body Composition / Q000235:genetics*; D001835:Body Weight / Q000235:genetics; D002417:Cattle / Q000235:genetics* / Q000254:growth & development*; D002874:Chromosome Mapping / Q000662:veterinary; D003433:Crosses, Genetic; D005260:Female; D008297:Male; D008460:Meat / Q000592:standards*; D040641:Quantitative Trait Loci