Saccharomyces Genome Database (SGD) provides tools to identify and analyze sequences from Saccharomyces cerevisiae and related sequences from other organisms.
The Saccharomyces Genome Database (SGD; http://www.yeastgenome.org/), a scientific database of the molecular biology and genetics of the yeast Saccharomyces cerevisiae, has recently developed several new resources that allow the comparison and integration of information on a genome-wide scale, enabling the user not only to find detailed information about individual genes, but also to make connections across groups of genes with common features and across different species. The Fungal Alignment Viewer displays alignments of sequences from multiple fungal genomes, while the Sequence Similarity Query tool displays PSI-BLAST alignments of each S.cerevisiae protein with similar proteins from any species whose sequences are contained in the non-redundant (nr) protein data set at NCBI. The Yeast Biochemical Pathways tool integrates groups of genes by their common roles in metabolism and displays the metabolic pathways in a graphical form. Finally, the Find Chromosomal Features search interface provides a versatile tool for querying multiple types of information in SGD.
Christie
Karen R
KR
Department of Genetics, School of Medicine, Stanford University, Stanford, CA 94305-5120, USA.
Weng
Shuai
S
Balakrishnan
Rama
R
Costanzo
Maria C
MC
Dolinski
Kara
K
Dwight
Selina S
SS
Engel
Stacia R
SR
Feierbach
Becket
B
Fisk
Dianna G
DG
Hirschman
Jodi E
JE
Hong
Eurie L
EL
Issel-Tarver
Laurie
L
Nash
Robert
R
Sethuraman
Anand
A
Starr
Barry
B
Theesfeld
Chandra L
CL
Andrada
Rey
R
Binkley
Gail
G
Dong
Qing
Q
Lane
Christopher
C
Schroeder
Mark
M
Botstein
David
D
Cherry
J Michael
JM
D000595:Amino Acid Sequence; D000818:Animals; D019295:Computational Biology; D030541:Databases, Genetic; D016681:Genome, Fungal; D006801:Humans; D016247:Information Storage and Retrieval; D020407:Internet; D008969:Molecular Sequence Data; D012441:Saccharomyces cerevisiae / Q000235:genetics*; D029701:Saccharomyces cerevisiae Proteins / Q000737:chemistry / Q000235:genetics*; D016415:Sequence Alignment; D017385:Sequence Homology; D012984:Software
D029701:Saccharomyces cerevisiae Proteins