PARIS: a proteomic analysis and resources indexation system.
We developed a system for managing data from two-dimensional electrophoresis-based proteomic experiments. Named PARIS, the system stores gel image and information about experiments and analysis procedures, allows the user to search and navigate in genomic and proteomic data, supports visual verification and validation of the analysis results, and provides tools for cross multi-experiment and multi-experimenter data validation and exploration.


BACKGROUND
The software is freely available from http://www.inra.fr/bia/J/imaste/Projets/PARIS/index.html
Wang
Juhui
J
INRA, Unit of Biometrics, 78352 Jouy-en-Josas, France. juhui.wang@jouy.inra.fr
Caron
Christophe
C
Mistou
Michel-Yves
MY
Gitton
Christophe
C
Trubuil
Alain
A
D000043:Abstracting and Indexing; D003628:Database Management Systems; D030562:Databases, Protein; D004282:Documentation; D020869:Gene Expression Profiling / Q000379:methods; D016247:Information Storage and Retrieval / Q000379:methods*; D020543:Proteome / Q000737:chemistry* / Q000235:genetics*; D016415:Sequence Alignment / Q000379:methods; D020539:Sequence Analysis, Protein / Q000379:methods*; D012984:Software; D014584:User-Computer Interface
D020543:Proteome