A radiation hybrid map of chicken chromosome 15.
We have constructed a radiation hybrid (RH) map of chicken chromosome (GGA) 15. This map can be used as a resource to efficiently map genes to this chromosome. The map has been developed using a 6000 rad chicken-hamster whole-genome radiation hybrid panel (ChickRH6). In total, six microsatellite loci, 18 sequence tagged sites (STSs) from BAC end sequences and 11 genes were typed on the panel. The initial framework map comprised eight markers, and an additional 23 markers were then added to generate the final map. The total map length was 334 centiRay6000 (cR6000). The estimated retention frequency for the data set was 18%. Using an estimated physical length of 21 Mb, the ratio between cR6000 and physical distance over GGA15 was estimated to be 0.063 Mb/cR6000. The present map increases the marker density and the marker resolution on GGA15 and enables fast mapping of new chicken genes homologous to genes from human chromosomes 12 and 22.
Jennen
D G J
DG
Animal Breeding and Genetics Group, Wageningen Institute of Animal Sciences, Wageningen University, Wageningen, The Netherlands. danyel.jennen@wur.nl
Crooijmans
R P M A
RP
Morisson
M
M
Grootemaat
A E
AE
Van Der Poel
J J
JJ
Vignal
A
A
Groenen
M A M
MA
D000818:Animals; D002645:Chickens / Q000235:genetics*; D002875:Chromosomes / Q000235:genetics*; D017931:DNA Primers; D018895:Microsatellite Repeats / Q000235:genetics; D021101:Radiation Hybrid Mapping; D016324:Sequence Tagged Sites
D017931:DNA Primers