title: Analysis of diffusion tensor magnetic resonance imaging data using principal component analysis.
abstract: An analysis method for diffusion tensor (DT) magnetic resonance imaging data is described, which, contrary to the standard method (multivariate fitting), does not require a specific functional model for diffusion-weighted (DW) signals. The method uses principal component analysis (PCA) under the assumption of a single fibre per pixel. PCA and the standard method were compared using simulations and human brain data. The two methods were equivalent in determining fibre orientation. PCA-derived fractional anisotropy and DT relative anisotropy had similar signal-to-noise ratio (SNR) and dependence on fibre shape. PCA-derived mean diffusivity had similar SNR to the respective DT scalar, and it depended on fibre anisotropy. Appropriate scaling of the PCA measures resulted in very good agreement between PCA and DT maps. In conclusion, the assumption of a specific functional model for DW signals is not necessary for characterization of anisotropic diffusion in a single fibre.
authors.affiliation: Department of Psychology, University of Sheffield, Sheffield S10 2TP, UK. n.papadakis@shef.ac.uk
authors.forename: N G
authors.initials: NG
authors.lastname: Papadakis
authors.forename: Y
authors.initials: Y
authors.lastname: Zheng
authors.forename: I D
authors.initials: ID
authors.lastname: Wilkinson
mesh_terms: D000328:Adult; D000465:Algorithms; D001921:Brain / Q000033:anatomy & histology*; D038524:Diffusion Magnetic Resonance Imaging / Q000379:methods*; D005260:Female; D006801:Humans; D007090:Image Interpretation, Computer-Assisted / Q000379:methods*; D008297:Male; D025341:Principal Component Analysis; D015203:Reproducibility of Results; D012680:Sensitivity and Specificity