title: Identification of a novel basic helix-loop-helix-PAS factor, NXF, reveals a Sim2 competitive, positive regulatory role in dendritic-cytoskeleton modulator drebrin gene expression.
abstract: Sim2, a basic helix-loop-helix (bHLH)-PAS transcriptional repressor, is thought to be involved in some symptoms of Down's syndrome. In the course of searching for hypothetical Sim2 relatives, we isolated another bHLH-PAS factor, NXF. NXF was a novel gene and was selectively expressed in neuronal tissues. While no striking homolog of NXF was found in vertebrates, a Caenorhabditis elegans putative transcription factor, C15C8.2, showed similarity in the bHLH-PAS domain. NXF had an activation domain as a transcription activator, and Arnt-type bHLH-PAS subfamily members were identified as the heterodimer partners of NXF. The NXF/Arnt heterodimer was capable of binding and activating a subset of Sim2/Arnt target DNA variants, and Sim2 could compete with the NXF activity on the elements. We showed that Drebrin had several such NXF/Arnt binding elements on the promoter, which could be direct or indirect cross talking points between NXF (activation) and Sim2 (repression) action. Drebrin has been reported to be engaged in dendritic-cytoskeleton modulation at synapses, and such a novel NXF signaling system on neural gene promoter may be a molecular target of the adverse effects of Sim2 in the mental retardation of Down's syndrome.
authors.affiliation: Environmental Health Science Laboratory, Sumitomo Chemical Co. Ltd., Konohana-ku, Osaka 554-8558, Japan. ooe@sc.sumitomo-chem.co.jp
authors.forename: Norihisa
authors.initials: N
authors.lastname: Ooe
authors.forename: Koichi
authors.initials: K
authors.lastname: Saito
authors.forename: Nobuyoshi
authors.initials: N
authors.lastname: Mikami
authors.forename: Iwao
authors.initials: I
authors.lastname: Nakatuka
authors.forename: Hideo
authors.initials: H
authors.lastname: Kaneko
mesh_terms: D000595:Amino Acid Sequence; D000818:Animals; D001483:Base Sequence; D051792:Basic Helix-Loop-Helix Proteins; D001667:Binding, Competitive; D002874:Chromosome Mapping; D003001:Cloning, Molecular; D003599:Cytoskeleton / Q000378:metabolism; D004247:DNA / Q000235:genetics; D004268:DNA-Binding Proteins / Q000737:chemistry / Q000235:genetics / Q000378:metabolism*; D003712:Dendrites / Q000378:metabolism; D004314:Down Syndrome / Q000378:metabolism; D005786:Gene Expression Regulation; D018257:Helix-Loop-Helix Motifs; D006801:Humans; D051379:Mice; D008954:Models, Biological; D008969:Molecular Sequence Data; D009479:Neuropeptides / Q000235:genetics*; D011401:Promoter Regions, Genetic; D012333:RNA, Messenger / Q000235:genetics / Q000378:metabolism; D051381:Rats; D017386:Sequence Homology, Amino Acid; D014157:Transcription Factors / Q000737:chemistry / Q000235:genetics / Q000378:metabolism*
chemical_list: D051792:Basic Helix-Loop-Helix Proteins; D004247:DNA; D004268:DNA-Binding Proteins; D009479:Neuropeptides; D012333:RNA, Messenger; D014157:Transcription Factors; C481603:NPAS4 protein, human; C516513:Npas4 protein, rat; C417032:SIM2 protein, human; C486578:Sim2 protein, mouse; C053386:drebrins