title: Identification of quantitative trait loci for growth and carcass composition in cattle.
abstract: A genomic screening to detect quantitative trait loci (QTL) affecting growth, carcass composition and meat quality traits was pursued. Two hundred nineteen microsatellite markers were genotyped on 176 of 620 (28%) progeny from a Brahman x Angus sire mated to mostly MARC III dams. Selective genotyping, based on retail product yield (%) and fat yield (%), was used to select individuals to be genotyped. Traits included in the study were birth weight (kg), hot carcass weight (kg), retail product yield, fat yield, marbling score (400 = slight00 and 500 = small00), USDA yield grade, and estimated kidney, heart and pelvic fat (%). The QTL were classified as significant when the expected number of false positives (ENFP) was less than 0.05 (F-statistic greater than 17.3), and suggestive when the ENFP was <1 (F-statistic between 10.2 and 17.3). A significant QTL (F = 19; ENFP = 0.02) was detected for marbling score at centimorgan (cM) 54 on chromosome 2. Suggestive QTL were detected for fat yield at 50 cM, for retail product yield at 53 cM, and for USDA yield grade at 63 cM on chromosome 1, for marbling score at 56 cM, for retail product yield at 70 cM, and for estimated kidney, heart and pelvic fat at 79 cM on chromosome 3, for marbling score at 44 cM, for hot carcass weight at 49 cM, and for estimated kidney, heart and pelvic fat at 62 cM on chromosome 16, and for fat yield at 35 cM on chromosome 17. Two suggestive QTL for birth weight were identified, one at 12 cM on chromosome 20 and the other at 56 cM on chromosome 21. An additional suggestive QTL was detected for retail product yield, for fat yield, and for USDA yield grade at 26 cM on chromosome 26. Results presented here represent the initial search for quantitative trait loci in this family. Validation of detected QTL in other populations will be necessary.
authors.affiliation: USDA-ARS, US Meat Animal Research Center, Clay Center, NE 68933-0166, USA. casas@email.marc.usda.gov
authors.forename: E
authors.initials: E
authors.lastname: Casas
authors.forename: J W
authors.initials: JW
authors.lastname: Keele
authors.forename: S D
authors.initials: SD
authors.lastname: Shackelford
authors.forename: M
authors.initials: M
authors.lastname: Koohmaraie
authors.forename: R T
authors.initials: RT
authors.lastname: Stone
mesh_terms: D000383:Agriculture / Q000379:methods; D000818:Animals; D001947:Breeding / Q000379:methods; D002417:Cattle / Q000235:genetics* / Q000254:growth & development*; D002874:Chromosome Mapping; D016678:Genome; D008460:Meat; D018895:Microsatellite Repeats / Q000235:genetics; D040641:Quantitative Trait Loci / Q000235:genetics*