title: Modeling charge transfer in the photosynthetic reaction center.
abstract: In this work, we present a model to elucidate the unidirectionality of the primary charge-separation process in the bacterial reaction centers. We have used a model of three sites/molecules with electron transfer beginning at site 1 with an option to proceed to site 2 or site 3. We used a stochastic model with arbitrary correlation functions. We get the quantum yields of electron escape via the sites 2,3 in two limiting cases that correspond to a spectral density of underdamped and overdamped Brownian oscillator. In the fast modulation limit of an overdamped regime we get the effect, which was named "fear of death," in which for strong enough sink parameters the electron has a tendency to avoid the place with greater sink. The presented model was used to provide a plausible explanation of the temperature dependence of the quantum yields of the Rhodobacter sphaeroides photosynthetic reaction center in the high-temperature regime.
authors.affiliation: Institute of Experimental Physics, Slovak Academy of Sciences, Watsonova 47, 043 53 Kosice, Slovak Republic. pudlak@saske.sk
authors.forename: Michal
authors.initials: M
authors.lastname: Pudlak
authors.forename: Richard
authors.initials: R
authors.lastname: Pincak
mesh_terms: D055592:Biophysical Phenomena; D001703:Biophysics; D004579:Electron Transport; D008390:Markov Chains; D008956:Models, Chemical; D015233:Models, Statistical; D016011:Normal Distribution; D009991:Oscillometry; D045322:Photosynthetic Reaction Center Complex Proteins / Q000502:physiology*; D013696:Temperature
chemical_list: D045322:Photosynthetic Reaction Center Complex Proteins