title: ArrayExpress: a public database of gene expression data at EBI.
abstract: ArrayExpress is a public repository for microarray-based gene expression data, resulting from the implementation of the MAGE object model to ensure accurate data structuring and the MIAME standard, which defines the annotation requirements. ArrayExpress accepts data as MAGE-ML files for direct submissions or data from MIAMExpress, the MIAME compliant web-based annotation and submission tool of EBI. A team of curators supports the submission process, providing assistance in data annotation. Data retrieval is performed through a dedicated web interface. Relevant results may be exported to ExpressionProfiler, the EBI based expression analysis tool available online (http://www.ebi.ac.uk/arrayexpress).
authors.affiliation: EMBL Outstation-Hinxton, European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, United Kingdom.
authors.forename: Philippe
authors.initials: P
authors.lastname: Rocca-Serra
authors.forename: Alvis
authors.initials: A
authors.lastname: Brazma
authors.forename: Helen
authors.initials: H
authors.lastname: Parkinson
authors.forename: Ugis
authors.initials: U
authors.lastname: Sarkans
authors.forename: Mohammadreza
authors.initials: M
authors.lastname: Shojatalab
authors.forename: Sergio
authors.initials: S
authors.lastname: Contrino
authors.forename: Jaak
authors.initials: J
authors.lastname: Vilo
authors.forename: Niran
authors.initials: N
authors.lastname: Abeygunawardena
authors.forename: Gaurab
authors.initials: G
authors.lastname: Mukherjee
authors.forename: Ele
authors.initials: E
authors.lastname: Holloway
authors.forename: Misha
authors.initials: M
authors.lastname: Kapushesky
authors.forename: Patrick
authors.initials: P
authors.lastname: Kemmeren
authors.forename: Gonzalo Garcia
authors.initials: GG
authors.lastname: Lara
authors.forename: Ahmet
authors.initials: A
authors.lastname: Oezcimen
authors.forename: Susanna-Assunta
authors.initials: SA
authors.lastname: Sansone
mesh_terms: D019295:Computational Biology; D030541:Databases, Genetic; D015870:Gene Expression; D020411:Oligonucleotide Array Sequence Analysis