PDBSprotEC: a Web-accessible database linking PDB chains to EC numbers via SwissProt.
A mapping between chains in the Protein Databank and Enzyme Classification numbers is invaluable for research into structure-function relationships. Mapping at the chain level is a non-trivial problem and we present an automatically updated Web-server, which provides this link in a queryable form and as a downloadable XML or flat file.
Martin
Andrew C R
AC
School of Animal and Microbial Science, The University of Reading, Whiteknights, PO Box 228, Reading RG6 6AJ, UK. andrew@bioinf.org.uk
D003628:Database Management Systems; D030562:Databases, Protein / Q000145:classification / Q000592:standards*; D004282:Documentation; D004798:Enzymes / Q000737:chemistry* / Q000145:classification* / Q000592:standards; D016247:Information Storage and Retrieval / Q000379:methods / Q000592:standards; D020407:Internet; D011506:Proteins / Q000737:chemistry* / Q000145:classification* / Q000592:standards; D009626:Terminology as Topic; D006113:United Kingdom
D004798:Enzymes; D011506:Proteins