title: Redox-dependent open and closed forms of the active site of the bacterial respiratory nitric-oxide reductase revealed by cyanide binding studies.
abstract: The bacterial respiratory nitric-oxide reductase (NOR) catalyzes the respiratory detoxification of nitric oxide in bacteria and Archaea. It is a member of the well known super-family of heme-copper oxidases but has a [heme Fe-non-heme Fe] active site rather than the [heme Fe-Cu(B)] active site normally associated with oxygen reduction. Paracoccus denitrificans NOR is spectrally characterized by a ligand-to-metal charge transfer absorption band at 595 nm, which arises from the high spin ferric heme iron of a micro-oxo-bridged [heme Fe(III)-O-Fe(III)] active site. On reduction of the nonheme iron, the micro-oxo bridge is broken, and the ferric heme iron is hydroxylated or hydrated, depending on the pH. At present, the catalytic cycle of NOR is a matter of much debate, and it is not known to which redox state(s) of the enzyme nitric oxide can bind. This study has used cyanide to probe the nature of the active site in a number of different redox states. Our observations suggest that the micro-oxo-bridged [heme Fe(III)-O-Fe(III)] active site represents a closed or resting state of NOR that can be opened by reduction of the non-heme iron.
authors.affiliation: School of Biological Sciences and School of Chemical Sciences and Pharmacy, Centre for Metalloprotein Spectroscopy and Biology, University of East Anglia, Norwich, NR4 7TJ, United Kingdom.
authors.forename: Karin L C
authors.initials: KL
authors.lastname: Grönberg
authors.forename: Nicholas J
authors.initials: NJ
authors.lastname: Watmough
authors.forename: Andrew J
authors.initials: AJ
authors.lastname: Thomson
authors.forename: David J
authors.initials: DJ
authors.lastname: Richardson
authors.forename: Sarah J
authors.initials: SJ
authors.lastname: Field
mesh_terms: D001419:Bacteria / Q000201:enzymology*; D001665:Binding Sites; D002384:Catalysis; D003486:Cyanides / Q000737:chemistry*; D004305:Dose-Response Relationship, Drug; D004583:Electrons; D006418:Heme / Q000737:chemistry; D007501:Iron; D007700:Kinetics; D008024:Ligands; D009569:Nitric Oxide / Q000378:metabolism; D010084:Oxidation-Reduction; D010088:Oxidoreductases / Q000737:chemistry*; D010100:Oxygen / Q000378:metabolism; D010101:Oxygen Consumption; D010231:Paracoccus denitrificans / Q000201:enzymology; D011190:Potassium Cyanide / Q000737:chemistry / Q000494:pharmacology; D011485:Protein Binding; D013997:Time Factors; D014466:Ultraviolet Rays
chemical_list: D003486:Cyanides; D008024:Ligands; D009569:Nitric Oxide; D006418:Heme; D007501:Iron; D010088:Oxidoreductases; C034747:nitric-oxide reductase; D011190:Potassium Cyanide; D010100:Oxygen