title: Identification method based on PCR combined with automated ribotyping for tracking probiotic Lactobacillus strains colonizing the human gut and vagina.
abstract: OBJECTIVE
  A molecular methodology based on PCR-associated automated ribotyping was developed to specifically detect the Lactobacillus strains of two probiotic products (an orally administered lyophilized preparation and vaginal tablets) in human faeces and vaginal swabs.
  
  
  RESULTS
  The 16S-23S rDNA sequences and the ribotype profiles of the probiotic lactobacilli were characterized and new species-specific primer sets were designed. The identification of faecal and vaginal lactobacilli isolated from subjects administered with the probiotic products was performed by using PCR with species-specific primers followed by strain-specific automated ribotyping.
  
  
  CONCLUSIONS
  The PCR-ribotyping identification allowed to study the colonization patterns of the probiotic lactobacilli in the human gut and vagina evidencing the strains with the best survival capability.
  
  
  CONCLUSIONS
  The proposed molecular method represents a powerful tool of strain-specific identification, useful for differentiating exogenous from indigenous strains in any microbial ecosystem and for rationally choosing probiotic bacteria with the best chance of survival in the host.
authors.affiliation: Department of Pharmaceutical Sciences, University of Bologna, Bologna, Italy.
authors.forename: M
authors.initials: M
authors.lastname: Massi
authors.forename: B
authors.initials: B
authors.lastname: Vitali
authors.forename: F
authors.initials: F
authors.lastname: Federici
authors.forename: D
authors.initials: D
authors.lastname: Matteuzzi
authors.forename: P
authors.initials: P
authors.lastname: Brigidi
mesh_terms: D015169:Colony Count, Microbial; D001330:Electronic Data Processing; D005243:Feces / Q000382:microbiology; D005260:Female; D006801:Humans; D007422:Intestines / Q000382:microbiology*; D007778:Lactobacillus / Q000235:genetics / Q000302:isolation & purification* / Q000378:metabolism; D016133:Polymerase Chain Reaction / Q000379:methods; D019936:Probiotics / Q000032:analysis*; D021521:Ribotyping / Q000379:methods; D014621:Vagina / Q000382:microbiology*