title: Fluorescence and kinetic analysis of the SpoIIAB phosphorylation reaction, a key regulator of sporulation in Bacillus subtilis.
abstract: Sporulation in Bacillus subtilis provides a valuable model system for studying differential gene expression. The anti-sigma factor SpoIIAB is a bifunctional protein, responsible for regulating the activity of the first sporulation-specific sigma factor, sigma(F). SpoIIAB can either bind to (and thus inhibit) sigma(F) or phosphorylate the anti-anti-sigma factor SpoIIAA. The phosphorylation reaction follows an unusual time course in which a pre-steady-state phase is succeeded by a slower steady-state phase. Previous experiments have shown that in the steady-state phase SpoIIAB is unable to inhibit sigma(F). A fluorescent derivative of SpoIIAB (AB-F97W) was made that was indistinguishable from the wild type in its interactions with SpoIIAA and sigma(F). AB-F97W exhibited distinctive changes in its fluorescence intensity when bound to ATP, ADP, or SpoIIAA. By following changes in the fluorescence properties of AB-F97W during the phosphorylation reaction, we confirmed a previous hypothesis that during the steady-state phase the predominant species are SpoIIAA.SpoIIAB.ADP complexes. The formation of these complexes is responsible for the slowing of the reaction, an important feature during sporulation since it reduces the loss of ATP in the nutrient-deprived cell. We also show that, to form a complex with SpoIIAA and ADP during the reaction, SpoIIAB must undergo a change in state which increases its affinity for ADP, and that this change in state is stimulated by its interaction with SpoIIAA. We derive a model of the reaction using previously determined kinetic and binding constants, and relate these findings to the known structure of SpoIIAB.
authors.affiliation: Microbiology Unit, Department of Biochemistry, University of Oxford, UK.
authors.forename: Joanna
authors.initials: J
authors.lastname: Clarkson
authors.forename: Jwu-Ching
authors.initials: JC
authors.lastname: Shu
authors.forename: David A
authors.initials: DA
authors.lastname: Harris
authors.forename: Iain D
authors.initials: ID
authors.lastname: Campbell
authors.forename: Michael D
authors.initials: MD
authors.lastname: Yudkin
mesh_terms: D000244:Adenosine Diphosphate / Q000737:chemistry / Q000378:metabolism; D000255:Adenosine Triphosphate / Q000737:chemistry / Q000378:metabolism; D001412:Bacillus subtilis / Q000235:genetics / Q000502:physiology*; D001426:Bacterial Proteins / Q000737:chemistry* / Q000235:genetics / Q000378:metabolism*; D001665:Binding Sites / Q000235:genetics; D005454:Fluorescence Polarization; D007700:Kinetics; D008024:Ligands; D016297:Mutagenesis, Site-Directed; D010649:Phenylalanine / Q000235:genetics; D010710:Phosphates / Q000737:chemistry / Q000378:metabolism; D010766:Phosphorylation; D013050:Spectrometry, Fluorescence / Q000379:methods; D013171:Spores, Bacterial / Q000235:genetics / Q000502:physiology; D014364:Tryptophan / Q000235:genetics
chemical_list: D001426:Bacterial Proteins; D008024:Ligands; D010710:Phosphates; C030069:spore-specific proteins, Bacillus; D010649:Phenylalanine; D000244:Adenosine Diphosphate; D014364:Tryptophan; D000255:Adenosine Triphosphate