title: Construction of a high-density linkage map of Italian ryegrass (Lolium multiflorum Lam) using restriction fragment length polymorphism, amplified fragment length polymorphism, and telomeric repeat associated sequence markers.
abstract: To construct a high-density molecular linkage map of Italian ryegrass (Lolium multiflorum Lam), we used a two-way pseudo-testcross F1 population consisting of 82 individuals to analyze three types of markers: restriction fragment length polymorphism markers, which we detected by using genomic probes from Italian ryegrass as well as heterologous anchor probes from other species belonging to the Poaceae family, amplified fragment length polymorphism markers, which we detected by using PstI/MseI primer combinations, and telomeric repeat associated sequence markers. Of the restriction fragment length polymorphism probes that we generated from a PstI genomic library, 74% (239 of 323) of randomly selected probes detected hybridization patterns consistent with single-copy or low-copy genetic locus status in the screening. The 385 (mostly restriction fragment length polymorphism) markers that we selected from the 1226 original markers were grouped into seven linkage groups. The maps cover 1244.4 cM, with an average of 3.7 cM between markers. This information will prove useful for gene targeting, quantitative trait loci mapping, and marker-assisted selection in Italian ryegrass.
authors.affiliation: Japan Grassland Farming and Forage Seed Association, Forage Crop Research Institute, Tochigi, Japan.
authors.forename: Maiko
authors.initials: M
authors.lastname: Inoue
authors.forename: Zhensheng
authors.initials: Z
authors.lastname: Gao
authors.forename: Mariko
authors.initials: M
authors.lastname: Hirata
authors.forename: Masahiro
authors.initials: M
authors.lastname: Fujimori
authors.forename: Hongwei
authors.initials: H
authors.lastname: Cai
mesh_terms: D002874:Chromosome Mapping; D003433:Crosses, Genetic; D017931:DNA Primers; D004591:Electrophoresis, Polyacrylamide Gel; D015723:Gene Library; D005819:Genetic Markers; D007558:Italy; D008129:Lolium / Q000235:genetics*; D016133:Polymerase Chain Reaction; D012150:Polymorphism, Restriction Fragment Length; D026801:Synteny / Q000235:genetics*; D020080:Tandem Repeat Sequences; D016615:Telomere / Q000235:genetics*
chemical_list: D017931:DNA Primers; D005819:Genetic Markers