title: Searching for pathogenic gene functions to cervical cancer.
abstract: OBJECTIVE
  Molecular pathology of cervical cancers associated with human papillomavirus (HPV) infection is presently unclear. In an effort to clarify this issue, we investigated gene expression profiles and pathogenic cellular processes of cervical cancer lesions.
  
  
  METHODS
  Tissues of 11 patients (invasive cancer stages Ib-IIIa) were investigated by a cDNA microarray of 4700 genes, hierarchical clustering and the Gene Ontology (GO).
  
  
  RESULTS
  We identified 74 genes showing a more than 2-fold difference in their expression in at least 8 out of 11 patients. Among these, 33 genes were up-regulated, in contrast, 41 genes were down-regulated. The gene expression profiles were classified into mutually dependent 345 function sets, resulting in 611 cellular processes according to the GO. The GO analysis showed that cervical carcinogenesis underwent complete down-regulation of cell death, protein biosynthesis, and nucleic acid metabolism. Also, genes belonging to nucleic acid binding and structural molecule activity were significantly down-regulated. In contrast, significant up-regulation was shown in skeletal development, immune response, and extracellular activity.
  
  
  CONCLUSIONS
  These data suggest that the regulated genes and cellular processes could be further used for predicting prognosis and diagnosis of cervical cancer patients, and further investigation and functional characterization of the identified genes is warranted.
authors.affiliation: Department of Obstetrics and Gynecology, College of Medicine, The Catholic University of Korea, Seoul, South Korea.
authors.forename: Woong Shick
authors.initials: WS
authors.lastname: Ahn
authors.forename: Su Mi
authors.initials: SM
authors.lastname: Bae
authors.forename: Joon Mo
authors.initials: JM
authors.lastname: Lee
authors.forename: Sung Eun
authors.initials: SE
authors.lastname: Namkoong
authors.forename: Sei-Jun
authors.initials: SJ
authors.lastname: Han
authors.forename: Young Lae
authors.initials: YL
authors.lastname: Cho
authors.forename: Gye Hyun
authors.initials: GH
authors.lastname: Nam
authors.forename: Jeong-Sun
authors.initials: JS
authors.lastname: Seo
authors.forename: Chong Kook
authors.initials: CK
authors.lastname: Kim
authors.forename: Yong-Wan
authors.initials: YW
authors.lastname: Kim
mesh_terms: D015536:Down-Regulation; D005260:Female; D020869:Gene Expression Profiling; D015972:Gene Expression Regulation, Neoplastic; D006801:Humans; D020411:Oligonucleotide Array Sequence Analysis; D027383:Papillomaviridae; D030361:Papillomavirus Infections / Q000150:complications / Q000235:genetics / Q000378:metabolism; D015854:Up-Regulation; D002583:Uterine Cervical Neoplasms / Q000235:genetics* / Q000378:metabolism / Q000473:pathology / Q000821:virology