title: Molecular cloning and characterization of nucleoside diphosphate (NDP) kinases from Chinese cabbage (Brassica campestris).
abstract: Nucleoside diphosphate kinases (NDPKs) are key metabolic enzymes that catalyze the synthesis of non-adenosine nucleoside triphosphates (NTP) by transfer of the terminal phosphate between NDP and NTP. Recently we isolated three NDPK cDNAs from Chinese cabbage cDNA library. BcNDK1 has 636 bp and encodes a putative 17.4 kDa protein, BcNDK2 has 854 bp and encodes a putative 25.5 kDa protein, and BcNDK3 is 986 bp long and encodes a putative 25.7 kDa protein. The precursor proteins of BcNDK2 and BcNDK3 have long N-terminal extensions containing putative chloroplast or mitochondrial targeting sequences. A phylogenic tree showed that the 3 BcNDKs are highly homologous to other plant NDPK genes, especially those of Arabidopsis. Expression of the BcNDK genes depended on the developmental stage and the conditions of seed germination. Most notably, expression of BcNDK2 increased dramatically in seedlings transferred to the light after germinating in the dark. In addition, BcNDK3 differed from BcNDK1 in being highly expressed in the hooks and cotyledons of seedlings. Although all BcNDKs were highly expressed in petals, BcNDK1 was also expressed in pistils. Expression of each of the BcNDKs increased as the flower bud matured. These results indicate that NDPKs are involved in physiological pathways activated by a variety of environmental conditions and at different developmental stages.
authors.affiliation: Division of Applied Biology and Chemistry, College of Agriculture and Life Sciences, Chungnam National University, Daejeon 305-764, Korea.
authors.forename: Dong Ho
authors.initials: DH
authors.lastname: Shin
authors.forename: Jun Gyo
authors.initials: JG
authors.lastname: In
authors.forename: Yong Pyo
authors.initials: YP
authors.lastname: Lim
authors.forename: Kohji
authors.initials: K
authors.lastname: Hasunuma
authors.forename: Kwan Sam
authors.initials: KS
authors.lastname: Choi
mesh_terms: D000465:Algorithms; D020816:Amino Acid Motifs; D000595:Amino Acid Sequence; D015152:Blotting, Northern; D001937:Brassica / Q000201:enzymology* / Q000235:genetics*; D003001:Cloning, Molecular; D017931:DNA Primers / Q000737:chemistry; D018076:DNA, Complementary / Q000378:metabolism; D015723:Gene Library; D008969:Molecular Sequence Data; D009701:Nucleoside-Diphosphate Kinase / Q000737:chemistry* / Q000235:genetics*; D009711:Nucleotides / Q000737:chemistry; D018532:Pisum sativum / Q000201:enzymology; D010802:Phylogeny; D016133:Polymerase Chain Reaction; D012313:RNA / Q000378:metabolism; D020133:Reverse Transcriptase Polymerase Chain Reaction; D017386:Sequence Homology, Amino Acid; D015398:Signal Transduction
chemical_list: D017931:DNA Primers; D018076:DNA, Complementary; D009711:Nucleotides; D012313:RNA; D009701:Nucleoside-Diphosphate Kinase