PINdb: a database of nuclear protein complexes from human and yeast.
Proteins Interacting in the Nucleus database (PINdb) is a database of protein complexes purified from the nucleus of human and yeast cells. It is compiled from the published literature and existing databases. Currently, PINdb contains mostly protein complexes that may be involved in gene transcription. To facilitate comparative analyses and identification of protein complexes, the compositional information is integrated with standardized gene nomenclature, annotation and protein sequences from public databases. The PINdb web interface provides a number of tools for (1) comparison of protein complexes, (2) search for a protein complex by its published name or by a partial list of its components and (3) browsing specific subsets or a functional classification of the complexes. Availablity: http://pin.mskcc.org
Luc
Phuong-Van
PV
Molecular Biology Program, Memorial Sloan-Kettering Cancer Center, New York, NY 10021, USA.
Tempst
Paul
P
D000043:Abstracting and Indexing / Q000379:methods*; D003628:Database Management Systems; D030562:Databases, Protein; D005656:Fungal Proteins / Q000032:analysis / Q000737:chemistry* / Q000145:classification; D006801:Humans; D016247:Information Storage and Retrieval / Q000379:methods*; D020407:Internet; D046912:Multiprotein Complexes / Q000032:analysis / Q000737:chemistry / Q000145:classification; D009323:Natural Language Processing; D009687:Nuclear Proteins / Q000032:analysis / Q000737:chemistry* / Q000145:classification; D010506:Periodicals as Topic; D014584:User-Computer Interface
D005656:Fungal Proteins; D046912:Multiprotein Complexes; D009687:Nuclear Proteins