title: Assessment and modeling of the toxicity of organic chemicals to Chlorella vulgaris: development of a novel database.
abstract: This study reports a database of toxicity values for 91 compounds assessed in a novel, rapid, and economical 15 min algal toxicity test. The toxicity data were measured using the unicellular green alga Chlorella vulgaris in an assay that determined the disappearance of fluorescein diacetate. The chemicals tested covered a wide range of physicochemical properties and mechanisms of action. Quantitative activity-activity relationships with the toxicity of the chemicals to other species (Tetrahymena pyriformis, Vibrio fischeri, and Pimephales promelas) showed strong relationships, although some differences resulting from different protocols were established. Quantitative structure-activity relationships (QSARs) were determined using linear [multiple linear regression (MLR)] and nonlinear [k-nearest neighbors (KNN)] methods. Three descriptors, accounting for hydrophobicity, electrophilicity, and a function of molecular size corrected for the presence of heteroatoms, were found to be important to model toxicity. The predictivity of MLR was compared to KNN using leave-one-out cross-validation and the simulation of an external test set. MLR demonstrated greater stability in validation. The results of this study showed that method selection in QSAR is task-dependent and it is inappropriate to resort to more complicated but less transparent methods, unless there are clear indications (e.g., inability of MLR to deal with the data set) for the need of such methods.
authors.affiliation: School of Pharmacy and Chemistry, Liverpool John Moores University, Byrom Street, Liverpool, L3 3AF, England. m.t.cronin@livjm.ac.uk
authors.forename: Mark T D
authors.initials: MT
authors.lastname: Cronin
authors.forename: Tatiana I
authors.initials: TI
authors.lastname: Netzeva
authors.forename: John C
authors.initials: JC
authors.lastname: Dearden
authors.forename: Robert
authors.initials: R
authors.lastname: Edwards
authors.forename: Andrew D P
authors.initials: AD
authors.lastname: Worgan
mesh_terms: D055598:Chemical Phenomena; D002627:Chemistry, Physical; D002708:Chlorella; D016208:Databases, Factual; D005452:Fluoresceins / Q000378:metabolism; D016014:Linear Models; D008956:Models, Chemical; D009930:Organic Chemicals / Q000633:toxicity*; D021281:Quantitative Structure-Activity Relationship; D018570:Risk Assessment; D018675:Toxicity Tests / Q000706:statistics & numerical data*
chemical_list: D005452:Fluoresceins; D009930:Organic Chemicals; C018506:diacetylfluorescein