title: RRE: a tool for the extraction of non-coding regions surrounding annotated genes from genomic datasets.
abstract: RRE allows the extraction of non-coding regions surrounding a coding sequence [i.e. gene upstream region, 5'-untranslated region (5'-UTR), introns, 3'-UTR, downstream region] from annotated genomic datasets available at NCBI.
  
  
  BACKGROUND
  RRE parser and web-based interface are accessible at http://www.bioinformatica.unito.it/bioinformatics/rre/rre.html
authors.affiliation: Department of Informatics, University of Piemonte Orientale Amedeo Avogadro, Spalto Marengo 33, Alessandria, Italy.
authors.forename: F
authors.initials: F
authors.lastname: Lazzarato
authors.forename: G
authors.initials: G
authors.lastname: Franceschinis
authors.forename: M
authors.initials: M
authors.lastname: Botta
authors.forename: F
authors.initials: F
authors.lastname: Cordero
authors.forename: R A
authors.initials: RA
authors.lastname: Calogero
mesh_terms: D002874:Chromosome Mapping / Q000379:methods; D003628:Database Management Systems; D030561:Databases, Nucleic Acid; D004282:Documentation / Q000379:methods; D016247:Information Storage and Retrieval / Q000379:methods*; D016415:Sequence Alignment / Q000379:methods*; D017422:Sequence Analysis, DNA / Q000379:methods*; D012984:Software; D020506:Untranslated Regions / Q000235:genetics*
chemical_list: D020506:Untranslated Regions