RRE: a tool for the extraction of non-coding regions surrounding annotated genes from genomic datasets.
RRE allows the extraction of non-coding regions surrounding a coding sequence [i.e. gene upstream region, 5'-untranslated region (5'-UTR), introns, 3'-UTR, downstream region] from annotated genomic datasets available at NCBI.


BACKGROUND
RRE parser and web-based interface are accessible at http://www.bioinformatica.unito.it/bioinformatics/rre/rre.html
Lazzarato
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F
Department of Informatics, University of Piemonte Orientale Amedeo Avogadro, Spalto Marengo 33, Alessandria, Italy.
Franceschinis
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G
Botta
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M
Cordero
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F
Calogero
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RA
D002874:Chromosome Mapping / Q000379:methods; D003628:Database Management Systems; D030561:Databases, Nucleic Acid; D004282:Documentation / Q000379:methods; D016247:Information Storage and Retrieval / Q000379:methods*; D016415:Sequence Alignment / Q000379:methods*; D017422:Sequence Analysis, DNA / Q000379:methods*; D012984:Software; D020506:Untranslated Regions / Q000235:genetics*
D020506:Untranslated Regions