title: Lack of association between Caucasian lung cancer risk and O6-methylguanine-DNA methyltransferase-codon 178 genetic polymorphism.
abstract: The formation of DNA adducts is thought to be a critical step for the induction of chemically induced cancer. O(6)-Methylguanine-DNA methyltransferase (MGMT) is a ubiquitously expressed enzyme that repairs DNA adducts formed by alkylating carcinogens. Thus, genetic polymorphisms of the MGMT that could result in differences in MGMT activity are potential risk factors for cancer. In the present study, we established a convenient and reliable genotyping method for the MGMT codon 178 polymorphism, a Lys (AAG) to Arg (AGG) substitution, using restriction fragment length polymorphism (RFLP), and studied differences in the distribution of this polymorphism in 92 Caucasian lung cancer patients and 85 controls. Frequencies of the "A" and "G" alleles (MGMT codon 178, AAG and AGG, respectively) were 0.91 and 0.09, respectively. The genetic polymorphism of the MGMT codon 178 was linked with that of the MGMT codon 143 (P < 0.05). The distribution of the MGMT codon 178 genetic polymorphism was not significantly different between lung cancer patients and controls. Thus, our study suggests that the MGMT codon 178 (and possibly 143) polymorphisms do not appear to markedly affect lung cancer risk for this population. In addition, we found an apparent 10bp-deletion in the intron before exon 5 by DNA sequencing. Because this "deletion" was observed in all sequenced samples (N = 20), the previously reported human (Caucasian) MGMT gene sequence should be revised to exclude this 10bp segment.
authors.affiliation: Department of Preventive Medicine, Cancer Research Institute, College of Medicine, Seoul National University, Chongno-go, South Korea. myang@snu.ac.kr
authors.forename: Mihi
authors.initials: M
authors.lastname: Yang
authors.forename: Brian F
authors.initials: BF
authors.lastname: Coles
authors.forename: Neil E
authors.initials: NE
authors.lastname: Caporaso
authors.forename: Yunhee
authors.initials: Y
authors.lastname: Choi
authors.forename: Nicholas P
authors.initials: NP
authors.lastname: Lang
authors.forename: Fred F
authors.initials: FF
authors.lastname: Kadlubar
mesh_terms: D003062:Codon / Q000235:genetics; D018736:DNA Adducts / Q000235:genetics; D005260:Female; D020022:Genetic Predisposition to Disease / Q000208:ethnology / Q000235:genetics; D006801:Humans; D008175:Lung Neoplasms / Q000208:ethnology / Q000235:genetics*; D008297:Male; D008875:Middle Aged; D019853:O(6)-Methylguanine-DNA Methyltransferase / Q000235:genetics*; D011110:Polymorphism, Genetic / Q000235:genetics; D012307:Risk Factors; D017422:Sequence Analysis, DNA / Q000379:methods; D044465:White People / Q000235:genetics
chemical_list: D003062:Codon; D018736:DNA Adducts; D019853:O(6)-Methylguanine-DNA Methyltransferase