title: Convergence among cave catfishes: long-branch attraction and a Bayesian relative rates test.
abstract: Convergence has long been of interest to evolutionary biologists. Cave organisms appear to be ideal candidates for studying convergence in morphological, physiological, and developmental traits. Here we report apparent convergence in two cave-catfishes that were described on morphological grounds as congeners: Prietella phreatophila and Prietella lundbergi. We collected mitochondrial DNA sequence data from 10 species of catfishes, representing five of the seven genera in Ictaluridae, as well as seven species from a broad range of siluriform outgroups. Analysis of the sequence data under parsimony supports a monophyletic Prietella. However, both maximum-likelihood and Bayesian analyses support polyphyly of the genus, with P. lundbergi sister to Ictalurus and P. phreatophila sister to Ameiurus. The topological difference between parsimony and the other methods appears to result from long-branch attraction between the Prietella species. Similarly, the sequence data do not support several other relationships within Ictaluridae supported by morphology. We develop a new Bayesian method for examining variation in molecular rates of evolution across a phylogeny.
authors.affiliation: Section of Integrative Biology and the Center for Computational Biology and Bioinformatics, University of Texas, Austin, TX 78712, USA.
authors.forename: T P
authors.initials: TP
authors.lastname: Wilcox
authors.forename: F J
authors.initials: FJ
authors.lastname: García de León
authors.forename: D A
authors.initials: DA
authors.lastname: Hendrickson
authors.forename: D M
authors.initials: DM
authors.lastname: Hillis
mesh_terms: D000818:Animals; D001499:Bayes Theorem; D002397:Catfishes / Q000235:genetics*; D004272:DNA, Mitochondrial / Q000235:genetics*; D019143:Evolution, Molecular; D016013:Likelihood Functions; D010802:Phylogeny; D013045:Species Specificity
chemical_list: D004272:DNA, Mitochondrial