Kordia algicida gen. nov., sp. nov., an algicidal bacterium isolated from red tide.
A bacterium (named OT-1(T)) that showed algicidal activity was isolated from sea water of Masan Bay, Korea, during an outbreak of red tide. Phylogenetic analysis based on 16S rDNA sequences showed that the isolate formed a distinct phyletic lineage within the family Flavobacteriaceae of the Cytophaga-Flavobacterium-Bacteroides group. No species with a validly published name showed >/=93 % 16S rRNA gene sequence similarity to strain OT-1(T). The isolate had major amounts of iso-branched and 3-hydroxy iso-branched fatty acids and menaquinone 6 and a DNA G+C content of 34 mol%; these chemotaxonomic characters also supported the placement of the organism in the family Flavobacteriaceae. The strain was Gram-negative, yellow-pigmented, non-motile, non-gliding, flexirubin-negative, strictly aerobic, catalase-negative, oxidase-positive and halophilic. Na(+), Ca(2+) and Mg(2+) ions were obligately required for growth. The strain utilized various sugars as sole carbon sources and degraded gelatin, skimmed milk and starch. Several phenotypic characters can be used to differentiate the test strain from phylogenetically related marine bacterial genera. On the basis of polyphasic evidence, it is proposed that strain OT-1(T) should be assigned to the family Flavobacteriaceae as Kordia algicida gen. nov., sp. nov. The type strain is OT-1(T) (=KCTC 8814P(T)=NBRC 1000336(T)).
Sohn
Jae Hak
JH
Microbiology Laboratory, Korea Ocean Research and Development Institute, Ansan PO Box 29, 425-600, Republic of Korea.
Lee
Jung-Hyun
JH
Microbiology Laboratory, Korea Ocean Research and Development Institute, Ansan PO Box 29, 425-600, Republic of Korea.
Yi
Hana
H
School of Biological Sciences, Seoul National University, Seoul 151-742, Republic of Korea.
Chun
Jongsik
J
School of Biological Sciences, Seoul National University, Seoul 151-742, Republic of Korea.
Bae
Kyung Sook
KS
Korean Collection for Type Cultures, Korea Research Institute of Bioscience and Biotechnology, PO Box 115, Yusong, Taejon 305-600, Republic of Korea.
Ahn
Tae-Young
TY
Department of Microbiology, Dankook University, Cheon-An 330-150, Republic of Korea.
Kim
Sang-Jin
SJ
Microbiology Laboratory, Korea Ocean Research and Development Institute, Ansan PO Box 29, 425-600, Republic of Korea.
D000818:Animals; D001482:Base Composition; D050260:Carbohydrate Metabolism; D041964:Cytophagaceae / Q000145:classification* / Q000235:genetics / Q000302:isolation & purification* / Q000378:metabolism; D004269:DNA, Bacterial / Q000737:chemistry / Q000235:genetics; D004275:DNA, Ribosomal / Q000235:genetics; D004141:Dinoflagellida / Q000382:microbiology*; D007723:Korea; D008855:Microscopy, Electron, Scanning; D008969:Molecular Sequence Data; D010641:Phenotype; D010802:Phylogeny; D012329:RNA, Bacterial / Q000235:genetics; D012336:RNA, Ribosomal, 16S / Q000235:genetics
D004269:DNA, Bacterial; D004275:DNA, Ribosomal; D012329:RNA, Bacterial; D012336:RNA, Ribosomal, 16S