title: Conformational states of trifluoroacetic acid-treated cytochrome c in the presence of salts and alcohols.
abstract: We have carried out a systematic investigation of salts- and alcohols-induced conformational alterations on the trifluoroacetic acid (TFA)-treated ferricytochrome c by soret absorption spectroscopy, far UV circular dichroism (CD), tryptophan fluorescence, and 1-anilino-8-naphthalene sulfonate (ANS) binding. TFA induces the unfolding of native cytochrome c obtained from horse heart leading to loss of secondary structure. The addition of increasing concentration of salts and alcohols leads to increase in MRE value at 222 and 208 nm indicating an increase in the alpha-helical content leading to formation of compact dimensional structure. Cytochrome c is a heme protein in which the resonance energy of tryptophan is transferred to heme resulting in quenched tryptophan fluorescence. Addition of alcohols leads to increase in tryptophan and ANS fluorescence. The tryptophan and ANS fluorescence in case of salts shows decreased fluorescence intensity. TFA-induced unfolded cytochrome c showed the soret absorption maximum at 394 nm. However, an intermediate state in presence of alcohols and salts showed the absorption maxima at 398 nm and 402 nm, respectively. Among all the salts and alcohols studied, K3Fe(CN)6 and butanol were found to be most effective as examined by the above-mentioned spectroscopic techniques. The order of effectiveness of alcohols was found to be butanol > propanol > ethanol > methanol. The following effective trend in the case of salts was obtained: K3Fe(CN)6 > K2SO4>KClO4 > KCl. These results suggest that alcohols induce an intermediate with molten globule-like conformation on the TFA unfolded state, whereas salts induce a refolded intermediate approaching native-like conformation.
authors.affiliation: Interdisciplinary Biotechnology Unit, Aligarh Muslim University, Aligarh-202002, India.
authors.forename: Aabgeena
authors.initials: A
authors.lastname: Naeem
authors.forename: Mohammad
authors.initials: M
authors.lastname: Akram
authors.forename: Rizwan Hasan
authors.initials: RH
authors.lastname: Khan
mesh_terms: D000438:Alcohols / Q000494:pharmacology*; D002942:Circular Dichroism; D045304:Cytochromes c / Q000737:chemistry / Q000187:drug effects*; D011487:Protein Conformation / Q000187:drug effects; D011489:Protein Denaturation / Q000187:drug effects; D012492:Salts / Q000494:pharmacology*; D013050:Spectrometry, Fluorescence; D014269:Trifluoroacetic Acid / Q000494:pharmacology*
chemical_list: D000438:Alcohols; D012492:Salts; D045304:Cytochromes c; D014269:Trifluoroacetic Acid