title: Effect of ionizing irradiation on human esophageal cancer cell lines by cDNA microarray gene expression analysis.
abstract: To provide new insights into the molecular mechanisms underlying the effect of irradiation on esophageal squamous cell carcinomas (ESCCs), we used a cDNA microarray screening of more than 4,000 genes with known functions to identify genes involved in the early response to ionizing irradiation. Two human ESCC cell lines, one each of well (TE-1) and poorly (TE-2) differentiated phenotypes were screened. Subconfluent cells of each phenotype were treated with single doses of 2.0 Gy or 8.0 Gy irradiations. After a 15 min incubation time-point, the cells were collected and analyzed. Compared with non-irradiated cells, many genes revealed at least 2-fold upregulation or downregulation at both doses in well or poorly differentiated ESCC cells. The common upregulated genes in well and poorly differentiated cell types at both irradiation doses included SCYA5, CYP51, SMARCD2, COX6C, MAPK8, FOS, UBE2M, RPL6, PDGFRL, TRAF2, TNFAIP6, ITGB4, GSTM3, and SP3 and common downregulated genes involved NFIL3, SMARCA2, CAPZA1, MetAP2, CITED2, DAP3, MGAT2, ATRX, CIAO1, and STAT6. Several of these genes were novel and not previously known to be associated with irradiation. Functional annotations of the modulated genes suggested that at the molecular level, irradiation appears to induce a regularizing balance in ESCC cell function. The genes modulated in the early response to irradiation may be useful in our understanding of the molecular basis of radiotherapy and in developing strategies to augment its effect or establish novel less hazardous alternative adjuvant therapies.
authors.affiliation: Department of Molecular Pathology, Institute of Gerontology, Nippon Medical School.
authors.forename: Hideki
authors.initials: H
authors.lastname: Bo
authors.forename: Mohammad
authors.initials: M
authors.lastname: Ghazizadeh
authors.forename: Hajime
authors.initials: H
authors.lastname: Shimizu
authors.forename: Yuji
authors.initials: Y
authors.lastname: Kurihara
authors.forename: Seiko
authors.initials: S
authors.lastname: Egawa
authors.forename: Yukichi
authors.initials: Y
authors.lastname: Moriyama
authors.forename: Takashi
authors.initials: T
authors.lastname: Tajiri
authors.forename: Oichi
authors.initials: O
authors.lastname: Kawanami
mesh_terms: D002294:Carcinoma, Squamous Cell / Q000235:genetics* / Q000532:radiotherapy; D004938:Esophageal Neoplasms / Q000235:genetics* / Q000532:radiotherapy; D015972:Gene Expression Regulation, Neoplastic / Q000528:radiation effects*; D006801:Humans; D008297:Male; D020411:Oligonucleotide Array Sequence Analysis; D011829:Radiation Dosage; D014407:Tumor Cells, Cultured