Protein Data Bank depositions from synchrotron sources.
A survey and analysis of Protein Data Bank (PDB) depositions from international synchrotron radiation facilities, based on the latest released PDB entries, are reported. The results (http://asdp.bnl.gov/asda/Libraries/) show that worldwide, every year since 1999, more than 50% of the deposited X-ray structures have used synchrotron facilities, reaching 75% by 2003. In this web-based database, all PDB entries among individual synchrotron beamlines are archived, synchronized with the weekly PDB release. Statistics regarding the quality of experimental data and the refined model for all structures are presented, and these are analysed to reflect the impact of synchrotron sources. The results confirm the common impression that synchrotron sources extend the size of structures that can be solved with equivalent or better quality than home sources.
Jiang
Jiansheng
J
Biology Department, Brookhaven National Laboratory, USA. jiang@bnl.gov
Sweet
Robert M
RM
D018360:Crystallography, X-Ray / Q000379:methods* / Q000706:statistics & numerical data* / Q000639:trends; D030562:Databases, Protein / Q000706:statistics & numerical data* / Q000639:trends; D016247:Information Storage and Retrieval / Q000706:statistics & numerical data* / Q000639:trends; D038622:Internationality; D011487:Protein Conformation; D011506:Proteins / Q000032:analysis / Q000737:chemistry* / Q000145:classification; D017356:Synchrotrons / Q000706:statistics & numerical data*
D011506:Proteins