title: Abundance, distribution, and diversity of viruses in alkaline, hypersaline Mono Lake, California.
abstract: Mono Lake is a large (180 km2), alkaline (pH approximately 10), moderately hypersaline (70-85 g kg(-1)) lake lying at the western edge of the Great Basin. An episode of persistent chemical stratification (meromixis) was initiated in 1995 and has resulted in depletion of oxygen and accumulation of ammonia and sulfide beneath the chemocline. Although previous studies have documented high bacterial abundances and marked seasonal changes in phytoplankton abundance and community composition, there have been no previous reports on the occurrence of viruses in this unique lake. Based on the high concentrations and diversity of microbial life in this lake, we hypothesized that planktonic viruses are also abundant and diverse. To examine the abundance and distribution of viruses and bacteria, water samples were collected from four stations along 5 to 15 vertical depths at each station. Viral abundance ranged from 1 x 10(8) to 1 x 10(9) mL(-1), among the highest observed in any natural aquatic system examined so far. Increases (p < 0.1) in viral densities were observed in the anoxic bottom water at multiple stations. However, regression analysis indicated that viral abundance could not be predicted by any single environmental parameter. Pulsed field gel electrophoresis revealed a diverse viral community in Mono Lake with genome sizes ranging from approximately 14 to >400 kb with most of the DNA in the 30 to 60 kb size range. Cluster analysis grouped the anoxic bottom-water viral community into a unique cluster differentiating it from surface and mid-water viral communities. A hybridization study using an indigenous viral isolate as a probe revealed an episodic pattern of temporal phage distribution with strong niche stratification between oxic and anoxic waters.
authors.affiliation: Environmental Analysis and Design, University of California, Irvine, CA 92696, USA. sjiang@uci.edu
authors.forename: S
authors.initials: S
authors.lastname: Jiang
authors.forename: G
authors.initials: G
authors.lastname: Steward
authors.forename: R
authors.initials: R
authors.lastname: Jellison
authors.forename: W
authors.initials: W
authors.lastname: Chu
authors.forename: S
authors.initials: S
authors.lastname: Choi
mesh_terms: D000641:Ammonia / Q000032:analysis; D001435:Bacteriophages / Q000302:isolation & purification*; D001483:Base Sequence; D002140:California; D016000:Cluster Analysis; D015342:DNA Probes; D004553:Electric Conductivity; D016521:Electrophoresis, Gel, Pulsed-Field; D005618:Fresh Water / Q000382:microbiology* / Q000821:virology*; D016679:Genome, Viral; D008856:Microscopy, Fluorescence; D008969:Molecular Sequence Data; D010100:Oxygen / Q000032:analysis; D020560:Proteobacteria / Q000235:genetics / Q000821:virology*; D012044:Regression Analysis; D017422:Sequence Analysis, DNA; D012965:Sodium Chloride / Q000032:analysis*; D013440:Sulfides / Q000032:analysis; D013696:Temperature
chemical_list: D015342:DNA Probes; D013440:Sulfides; D012965:Sodium Chloride; D000641:Ammonia; D010100:Oxygen