title: SARGE: a tool for creation of putative genetic networks.
abstract: CONCLUSIONS
  SARGE is a tool for creating, visualizing and manipulating a putative genetic network from time series microarray data. The tool assigns potential edges through time-lagged correlation, incorporates a clustering mechanism, an interactive visual graph representation and employs simulated annealing for network optimization.
  
  
  BACKGROUND
  The application is available as a .jar file from http://www.bioinformatics.cs.ncl.ac.uk/sarge/index.html.
authors.affiliation: School of Computing Science, University of Newcastle upon Tyne, Newcastle upon Tyne NE1 7RU, UK.
authors.forename: O J
authors.initials: OJ
authors.lastname: Shaw
authors.forename: C
authors.initials: C
authors.lastname: Harwood
authors.forename: L J
authors.initials: LJ
authors.lastname: Steggles
authors.forename: A
authors.initials: A
authors.lastname: Wipat
mesh_terms: D000465:Algorithms; D020869:Gene Expression Profiling / Q000379:methods*; D005786:Gene Expression Regulation / Q000502:physiology*; D008957:Models, Genetic; D020411:Oligonucleotide Array Sequence Analysis / Q000379:methods*; D010363:Pattern Recognition, Automated / Q000379:methods; D015398:Signal Transduction / Q000502:physiology*; D012984:Software; D014584:User-Computer Interface