A LightCycler real-time PCR hybridization probe assay for detecting food-borne thermophilic Campylobacter.
In a previous study, we reported the performance of a PCR assay amplifying 287-bp of the 16S rRNA gene of thermo-tolerant Campylobacter (C. jejuni, C. lari, C. coli) through an international ring-trial involving 12 participating laboratories. Based on the validated set of primers, a LightCycler real-time PCR assay (LC-PCR), which used fluorescent hybridization probes was developed. The test incorporated an internal amplification control co-amplified with the 16S rRNA gene of Campylobacter to monitor potential PCR inhibitors and ensure successful amplifications. The specificity study involving 39 Campylobacter and nine strains of other species indicated that the LC-PCR test was highly specific, giving cross-reactivity with only one strain of C. upsaliensis (CCUG19559). The sensitivity of the LC-PCR assay, evaluated in 32 spiked poultry-rinse or pork carcass-swab samples, was determined at 10CFU/ml carcass-rinse. The prevalence of samples positive for thermo-tolerant Campylobacter was 58.8% in 68 naturally contaminated poultry rinse samples tested by LC-PCR and the data were in good concordance with those of bacteriological method. The Ct values of the three replicates obtained for each sample tested in three different runs demonstrate that the LC-PCR was highly reproducible and afford a powerful tool for rapid detection of the thermo-tolerant Campylobacter strains.
Perelle
Sylvie
S
Agence Française de Sécurité Sanitaire des Aliments, Laboratoire d'Etudes et de Recherches sur la Qualité des Aliments et sur les Procédés Agroalimentaires, Maisons-Alfort 94700, France.
Josefsen
Mathilde
M
Hoorfar
Jeffrey
J
Dilasser
Françoise
F
Grout
Joël
J
Fach
Patrick
P
D000818:Animals; D002167:Campylobacter / Q000235:genetics* / Q000302:isolation & purification*; D002645:Chickens / Q000382:microbiology; D015342:DNA Probes / Q000032:analysis* / Q000235:genetics; D005456:Fluorescent Dyes; D005516:Food Microbiology; D020459:Genes, rRNA / Q000235:genetics; D008460:Meat / Q000382:microbiology; D016133:Polymerase Chain Reaction / Q000295:instrumentation / Q000379:methods*; D012336:RNA, Ribosomal, 16S / Q000235:genetics; D012680:Sensitivity and Specificity; D013552:Swine / Q000382:microbiology; D013997:Time Factors
D015342:DNA Probes; D005456:Fluorescent Dyes; D012336:RNA, Ribosomal, 16S