Microarray Data Analysis Toolbox (MDAT): for normalization, adjustment and analysis of gene expression data.
CONCLUSIONS
We introduce a novel Matlab toolbox for microarray data analysis. This toolbox uses normalization based upon a normally distributed background and differential gene expression based on five statistical measures. The objects in this toolbox are open source and can be implemented to suit your application.


BACKGROUND
MDAT v1.0 is a Matlab toolbox and requires Matlab to run. MDAT is freely available at http://microarray.omrf.org/publications/2004/knowlton/MDAT.zip.
Knowlton
Nicholas
N
Department of Arthritis and Immunology, Oklahoma Medical Research Foundation, 825 NE 13 Street, RP Rm 461 MS: 58, Oklahoma City, OK 73104, USA. knowltonn@omrf.ouhsc.edu <knowltonn@omrf.ouhsc.edu>
Dozmorov
Igor M
IM
Centola
Michael
M
D000465:Algorithms; D003627:Data Interpretation, Statistical; D020869:Gene Expression Profiling / Q000379:methods*; D020407:Internet; D020411:Oligonucleotide Array Sequence Analysis / Q000379:methods*; D016415:Sequence Alignment / Q000379:methods*; D017422:Sequence Analysis, DNA / Q000379:methods*; D012984:Software; D014584:User-Computer Interface