Viburnum phylogeny: evidence from the duplicated nuclear gene GBSSI.
DNA sequencing studies of the granule-bound starch synthase gene (GBSSI) indicate the presence of two loci in Viburnum. Gene trees from separate and combined phylogenetic analyses of the GBSSI paralogues are generally congruent with each other and with trees from previous analyses, especially those of Donoghue et al. [Syst. Bot. 29 (2004) 188] based on nuclear ribosomal ITS and chloroplast trnK intron DNA sequences. Specifically, our GBSSI trees confirm (i) the monophyly of some and non-monophyly of other traditionally recognized taxonomic sections, (ii) the presence of three major supra-sectional lineages within Viburnum, and (iii) the resolution of many species relationships within the section-level clades. Analyses of GBSSI also provide greater resolution of relationships within the largest supra-sectional lineage. Relationships at the base of the Viburnum phylogeny remain uncertain; in particular, the position of the root, relationships among the supra-sectional clades, and the exact placement of several smaller groups (e.g., Viburnum clemensiae, Viburnum urceolatum, and section Pseudotinus). In two lineages each GBSSI paralogue is represented by two distinct sequences. The presence of additional copies appears to be correlated with polyploidy in these clades. Placement of the homoeologues in our gene trees suggests the possibility of a hybrid origin for these polyploids.
Winkworth
Richard C
RC
Department of Ecology and Evolutionary Biology, Yale University, P.O. Box 208105, New Haven, CT 06520-8105, USA. richard.winkworth@yale.edu
Donoghue
Michael J
MJ
D001483:Base Sequence; D017931:DNA Primers; D040461:Gene Components; D020131:Genes, Duplicate / Q000235:genetics*; D016013:Likelihood Functions; D008957:Models, Genetic; D008969:Molecular Sequence Data; D010802:Phylogeny; D017422:Sequence Analysis, DNA; D013214:Starch Synthase / Q000235:genetics*; D027925:Viburnum / Q000235:genetics*
D017931:DNA Primers; C434607:granule-bound starch synthase I; D013214:Starch Synthase