IDDM2 and the polymorphism of the human tyrosine hydroxylase (hTH) gene in African Americans with type-1 diabetes.
In this study, we investigate the polymorphic microsatellite repeat (TCAT)n, in the insulin gene region that has been associated with susceptibility to type-1 diabetes in some Caucasian populations. The microsatellite repeat polymorphism begins at base pair 1,170 in intron 1 of the hTH gene, which is located on the short arm of chromosome 11. This study is the first to investigate the association of this microsatellite repeat polymorphism in African-American type-1 diabetes patients and controls. The predicted amplified sequence was 254 bp. We found five alleles among African Americans in the Washington, DC area. The alleles were labeled K5 (244 bp), K4 (248 bp), K3 (252 bp), K2 (256 bp), and K1 (260 bp), and heterozygosity was greater than 0.75. The most frequent allele of the hTH microsatellite repeats was K5 (248 bp) with a frequency 0.62 in controls and 0.66 in type-1 diabetes patients, which did not differ significantly. Although the largest allele was more frequent in controls, the difference was not statistically significant. The five alleles of the hTH microsatellite generated 15 different genotypes. The most frequent genotype in controls and patients was K5/K4, whose frequencies were 0.19 and 0.17, respectively. No significant differences in genotype frequencies were found between type-1 diabetes patients and controls. This data shifts the focus from hTH to the VNTR at the insulin gene for IDDM2, the second major candidate gene for type-1 diabetes.
Berka
Noureddine
N
Immunogenetics Laboratory, and Department of Pediatrics, Howard University Hospital, Washington, DC, USA. Noureddine.Berka@cls.ab.ca
Nunlee-Bland
Gail
G
Erabhaoui
Elhajja
E
Belmamoun
Maher
M
Dunston
Georgia M
GM
D001741:Black or African American / Q000235:genetics*; D000483:Alleles; D003922:Diabetes Mellitus, Type 1 / Q000235:genetics*; D006801:Humans; D007328:Insulin / Q000235:genetics; D018895:Microsatellite Repeats; D011110:Polymorphism, Genetic / Q000235:genetics*; D014446:Tyrosine 3-Monooxygenase / Q000235:genetics*
D007328:Insulin; D014446:Tyrosine 3-Monooxygenase