Transcarboxylase 5S structures: assembly and catalytic mechanism of a multienzyme complex subunit.
Transcarboxylase is a 1.2 million Dalton (Da) multienzyme complex from Propionibacterium shermanii that couples two carboxylation reactions, transferring CO(2)(-) from methylmalonyl-CoA to pyruvate to yield propionyl-CoA and oxaloacetate. Crystal structures of the 5S metalloenzyme subunit, which catalyzes the second carboxylation reaction, have been solved in free form and bound to its substrate pyruvate, product oxaloacetate, or inhibitor 2-ketobutyrate. The structure reveals a dimer of beta(8)alpha(8) barrels with an active site cobalt ion coordinated by a carbamylated lysine, except in the oxaloacetate complex in which the product's carboxylate group serves as a ligand instead. 5S and human pyruvate carboxylase (PC), an enzyme crucial to gluconeogenesis, catalyze similar reactions. A 5S-based homology model of the PC carboxyltransferase domain indicates a conserved mechanism and explains the molecular basis of mutations in lactic acidemia. PC disease mutations reproduced in 5S result in a similar decrease in carboxyltransferase activity and crystal structures with altered active sites.
Hall
Pamela R
PR
Department of Pharmacology, Case Western Reserve University, Cleveland, OH, USA.
Zheng
Run
R
Antony
Lizamma
L
Pusztai-Carey
Marianne
M
Carey
Paul R
PR
Yee
Vivien C
VC
D000595:Amino Acid Sequence; D001426:Bacterial Proteins / Q000737:chemistry* / Q000235:genetics / Q000302:isolation & purification; D001665:Binding Sites; D002087:Butyrates / Q000378:metabolism; D019878:Carboxyl and Carbamoyl Transferases / Q000737:chemistry* / Q000235:genetics / Q000302:isolation & purification; D020134:Catalytic Domain; D018360:Crystallography, X-Ray; D004791:Enzyme Inhibitors / Q000378:metabolism; D006801:Humans; D008969:Molecular Sequence Data; D009097:Multienzyme Complexes / Q000737:chemistry*; D016297:Mutagenesis, Site-Directed; D062907:Oxaloacetic Acid / Q000378:metabolism; D011424:Propionibacterium / Q000201:enzymology*; D011485:Protein Binding; D011487:Protein Conformation; D021122:Protein Subunits; D011766:Pyruvate Carboxylase / Q000737:chemistry / Q000235:genetics / Q000378:metabolism; D019289:Pyruvic Acid / Q000378:metabolism; D017386:Sequence Homology, Amino Acid
D001426:Bacterial Proteins; D002087:Butyrates; D004791:Enzyme Inhibitors; D009097:Multienzyme Complexes; D021122:Protein Subunits; D062907:Oxaloacetic Acid; C005087:alpha-ketobutyric acid; D019289:Pyruvic Acid; D019878:Carboxyl and Carbamoyl Transferases; C021580:Methylmalonyl-CoA carboxytransferase; D011766:Pyruvate Carboxylase