title: Pulsed-field gel electrophoresis analysis of Vibrio vulnificus strains isolated from Taiwan and the United States.
abstract: Vibrio vulnificus is a marine bacterium that causes human wound infections and septicemia with a high mortality rate. V. vulnificus strains from different clinical and environmental sources or geographic regions have been successfully characterized by ribotyping and several other methods. Pulsed-field gel electrophoresis (PFGE) is a highly discriminative method, but previous studies suggested that it was not suitable for examining the correlation of V. vulnificus strains from different origins. We employed PFGE to determine its efficacy for characterizing V. vulnificus strains from different geographic regions, characterizing a total of 153 strains from clinical and environmental origins from the United States and Taiwan after SfiI or NotI digestion. V. vulnificus strains showed a high intraspecific diversity by PFGE after SfiI or NotI digestion, and about 12% of the strains could not be typed by the use of either of these enzymes. For PFGE with SfiI digestion, most of the clinical and environmental strains from the United States were grouped into cluster A, while the strains from Taiwan were grouped into other clusters. Clinical strains from the United States showed a higher level of genetic homogeneity than clinical strains from Taiwan, and environmental strains from both regions showed a similarly high level of heterogeneity. PFGE with NotI digestion was useful for studying the correlation of clinical strains from the United States and Taiwan, but it was not suitable for analyzing environmental strains. The results showed that PFGE with SfiI digestion may be used to characterize V. vulnificus strains from distant geographic regions, with NotI being a recommended alternative enzyme.
authors.affiliation: Department of Microbiology, Soochow University, 70 Lin-Si Rd., Taipei, Taiwan 111, Republic of China. wonghc@scu.edu.tw
authors.forename: Hin-Chung
authors.initials: HC
authors.lastname: Wong
authors.forename: Shau-Yan
authors.initials: SY
authors.lastname: Chen
authors.forename: Meng-Yi
authors.initials: MY
authors.lastname: Chen
authors.forename: James D
authors.initials: JD
authors.lastname: Oliver
authors.forename: Lien-I
authors.initials: LI
authors.lastname: Hor
authors.forename: Wen-Cherng
authors.initials: WC
authors.lastname: Tsai
mesh_terms: D016521:Electrophoresis, Gel, Pulsed-Field; D004777:Environment; D005843:Geography; D010802:Phylogeny; D013624:Taiwan; D014481:United States; D014733:Vibrio / Q000145:classification* / Q000235:genetics / Q000302:isolation & purification