Expectation maximization strategies for multi-atlas multi-label segmentation.
It is well-known in the pattern recognition community that the accuracy of classifications obtained by combining decisions made by independent classifiers can be substantially higher that the accuracy of the individual classifiers. In order to combine multiple segmentations we introduce two extensions to an expectation maximization (EM) algorithm for ground truth estimation based on multiple experts (Warfield et al., MICCAI 2002). The first method repeatedly applies the Warfield algorithm with a subsequent integration step. The second method is a multi-label extension of the Warfield algorithm. Both extensions integrate multiple segmentations into one that is closer to the unknown ground truth than the individual segmentations. In atlas-based image segmentation, multiple classifiers arise naturally by applying different registration methods to the same atlas, or the same registration method to different atlases, or both. We perform a validation study designed to quantify the success of classifier combination methods in atlas-based segmentation. By applying random deformations, a given ground truth atlas is transformed into multiple segmentations that could result from imperfect registrations of an image to multiple atlas images. We demonstrate that a segmentation produced by combining multiple individual registration-based segmentations is more accurate for the two EM methods we propose than for simple label averaging.
Rohlfing
Torsten
T
Image Guidance Laboratories, Department of Neurosurgery, Stanford University, Stanford, CA, USA. rohlfing@stanford.edu
Russakoff
Daniel B
DB
Maurer
Calvin R
CR
D000465:Algorithms; D000818:Animals; D001271:Atlases as Topic; D001516:Bees; D001921:Brain / Q000033:anatomy & histology*; D003198:Computer Simulation; D005103:Expert Systems; D007089:Image Enhancement / Q000379:methods; D007090:Image Interpretation, Computer-Assisted / Q000379:methods*; D021621:Imaging, Three-Dimensional / Q000379:methods*; D016013:Likelihood Functions; D008954:Models, Biological; D015233:Models, Statistical; D010363:Pattern Recognition, Automated; D015203:Reproducibility of Results; D012680:Sensitivity and Specificity; D013382:Subtraction Technique