title: Phylogenetic analyses of the Fusarium poae, Fusarium sporotrichioides and Fusarium langsethiae species complex based on partial sequences of the translation elongation factor-1 alpha gene.
abstract: Phylogenetic relationships between four Fusarium species were studied using parts of the nuclear translation elongation factor-1 alpha (EF-1alpha) gene as a phylogenetic marker. Sequences from 12 isolates of Fusarium poae, 10 isolates of Fusarium sporotrichioides and 12 isolates of Fusarium langsethiae yielded 4, 5 and 5 haplotypes, respectively. In addition, we included one isolate of Fusarium kyushuense. The aligned sequences were subjected to neighbor-joining (NJ), maximum parsimony and maximum likelihood (ML) analyses. The results from the different analyses were highly concordant. The EF-1alpha-based phylogenies support the classification of F. langsethiae as a separate taxon in the section Sporotrichiella of Fusarium, as the closest sister taxon to F. sporotrichioides, while F. kyushuense is the sister taxon to F. poae. This corresponds well with the ability of F. langsethiae and F. sporotrichioides to produce T-2 and HT-2 toxins. In contrast, morphological characters indicate a closer relationship between F. langsethiae and F. poae on the one hand, and between F. sporotrichioides and F. kyushuense on the other hand.
authors.affiliation: Section of Food and Feed Microbiology, National Veterinary Institute, P.O. Box 8156 Dep, 0033 Oslo, Norway.
authors.forename: A K
authors.initials: AK
authors.lastname: Knutsen
authors.forename: M
authors.initials: M
authors.lastname: Torp
authors.forename: A
authors.initials: A
authors.lastname: Holst-Jensen
mesh_terms: D004271:DNA, Fungal / Q000737:chemistry / Q000302:isolation & purification; D047630:Depsipeptides; D005670:Fusarium / Q000145:classification* / Q000235:genetics* / Q000378:metabolism; D006239:Haplotypes; D016013:Likelihood Functions; D020648:Peptide Elongation Factor 1 / Q000235:genetics*; D010455:Peptides / Q000235:genetics / Q000378:metabolism; D010802:Phylogeny; D016133:Polymerase Chain Reaction; D016415:Sequence Alignment; D017422:Sequence Analysis, DNA; D013045:Species Specificity; D013605:T-2 Toxin / Q000031:analogs & derivatives* / Q000235:genetics / Q000378:metabolism; D014255:Trichothecenes / Q000235:genetics / Q000378:metabolism
chemical_list: D004271:DNA, Fungal; D047630:Depsipeptides; D020648:Peptide Elongation Factor 1; D010455:Peptides; D014255:Trichothecenes; C004456:beauvericin; D013605:T-2 Toxin; C012351:HT-2 toxin