title: SNPP: automating large-scale SNP genotype data management.
abstract: To manage high-throughput single nucleotide polymorphism (SNP) genotyping data efficiently, we developed a dynamic general database management system-SNPP (SNP Processor). It provides several functions, including data importing with comparison, Mendelian inheritance check within pedigrees, data compiling and exporting. Furthermore, SNPP may generate files for repeat genotyping and transform them into files that can be executed by a liquid handling system.
  
  
  BACKGROUND
  http://orclinux.creighton.edu/snpp/
  
  
  BACKGROUND
  lanjuanzhao@creighton.edu
authors.affiliation: Laboratory of Molecular and Statistical Genetics, College of Life Sciences, Hunan Normal University Changsha, Hunan 410081, China.
authors.forename: Lan-Juan
authors.initials: LJ
authors.lastname: Zhao
authors.forename: Miao-Xin
authors.initials: MX
authors.lastname: Li
authors.forename: Yan-Fang
authors.initials: YF
authors.lastname: Guo
authors.forename: Fu-Hua
authors.initials: FH
authors.lastname: Xu
authors.forename: Jin-Long
authors.initials: JL
authors.lastname: Li
authors.forename: Hong-Wen
authors.initials: HW
authors.lastname: Deng
mesh_terms: D000465:Algorithms; D002874:Chromosome Mapping / Q000379:methods*; D003628:Database Management Systems; D030561:Databases, Nucleic Acid; D005838:Genotype; D016247:Information Storage and Retrieval / Q000379:methods; D020407:Internet; D015810:Linkage Disequilibrium / Q000235:genetics*; D016415:Sequence Alignment / Q000379:methods*; D017422:Sequence Analysis, DNA / Q000379:methods*; D012984:Software; D014584:User-Computer Interface