TFExplorer: integrated analysis database for predicted transcription regulatory elements.
TFExplorer is a web-based integrated database for predicted regulatory elements in human, mouse and rat. It shows predicted binding sites of transcription factors in the promoter regions, along with their phylogenetic footprinting information. In addition, TFExplorer can search for genes that have a given sequence pattern in their promoter regions using the motif-searching method.


BACKGROUND
TFExplorer is freely available at http://mars.kribb.re.kr:8080/tfExplorer/


BACKGROUND
sskimb@kribb.re.kr.
Kim
Jinsoo
J
National Genome Information Center KRIBB, Daejeon, Korea.
Seo
Jungmin
J
Lee
Young Seek
YS
Kim
Sangsoo
S
D000465:Algorithms; D003628:Database Management Systems; D030562:Databases, Protein; D005786:Gene Expression Regulation / Q000502:physiology*; D005809:Genes, Regulator / Q000235:genetics*; D016247:Information Storage and Retrieval / Q000379:methods*; D016415:Sequence Alignment / Q000379:methods; D020539:Sequence Analysis, Protein / Q000379:methods; D018511:Systems Integration; D014157:Transcription Factors / Q000737:chemistry* / Q000235:genetics* / Q000378:metabolism; D014584:User-Computer Interface
D014157:Transcription Factors