title: Collisional activation of ions in RF ion traps and ion guides: the effective ion temperature treatment.
abstract: Ion transfer and storage using inhomogeneous radio frequency (RF) electric fields in combination with gas-assisted ion cooling and focusing constitutes one of the basic techniques in mass spectrometry today. The RF motion of ions in the bath gas environment involves a large number of ion-neutral collisions that leads to the internal activation of ions and their effective "heating" (when a thermal distribution of internal energies results). The degree of ion activation required in various applications may range from a minimum level (e.g., slightly raising the average internal energy) to an intense level resulting in ion fragmentation. Several research groups proposed using the effective temperature as a measure of ion activation under conditions of multiple ion-neutral collisions. Here we present approximate relationships for the effective ion temperature relevant to typical operation modes of RF multipole devices. We show that RF ion activation results in near-thermal energies for ions occupying an equilibrium position at the center of an RF trap, whereas increased ion activation can be produced by shifting ions off-center, e.g., by means of an external DC electric field. The ion dissociation in the linear quadrupole ion trap using the dipolar DC ion activation has been observed experimentally and interpreted in terms of the effective ion temperature.
authors.affiliation: Pacific Northwest National Laboratory, Richland, Washington 99352, USA.
authors.forename: Aleksey V
authors.initials: AV
authors.lastname: Tolmachev
authors.forename: Andrey N
authors.initials: AN
authors.lastname: Vilkov
authors.forename: Bogdan
authors.initials: B
authors.lastname: Bogdanov
authors.forename: Ljiljana
authors.initials: L
authors.lastname: Pasa-Tolić
authors.forename: Christophe D
authors.initials: CD
authors.lastname: Masselon
authors.forename: Richard D
authors.initials: RD
authors.lastname: Smith
mesh_terms: D005344:Fibrinopeptide A / Q000032:analysis*; D006358:Hot Temperature; D007477:Ions; D017550:Spectroscopy, Fourier Transform Infrared / Q000379:methods*
chemical_list: D007477:Ions; D005344:Fibrinopeptide A