title: Dynamics of multiple lin gene expression in Sphingomonas paucimobilis B90A in response to different hexachlorocyclohexane isomers.
abstract: Sphingomonas paucimobilis B90A is able to degrade the alpha-, beta-, gamma-, and delta-isomers of hexachlorocyclohexane (HCH). It contains the genes linA, linB, linC, linD, linE, and linR, which have been implicated in HCH degradation. In this study, dynamic expression of the lin genes was measured in chemostat-grown S. paucimobilis B90A by RNA dot blot hybridization and real-time reverse transcriptase PCR upon exposure to a pulse of different HCH isomers. Irrespective of the addition of HCH, linA, linB, and linC were all expressed constitutively. In contrast, linD and linE were induced with alpha-HCH (2 mg/liter) and gamma-HCH (7 mg/liter). A sharp increase in mRNA levels for linD and linE was observed from 10 to 45 min after the addition of alpha- or gamma-HCH. Induction of linD and linE was not detectable upon the addition of 0.7 mg of gamma-HCH per liter, although the compound was degraded by the cells. The addition of beta-HCH (5 mg/liter) or delta-HCH (20 mg/liter) did not lead to linE and linD induction, despite the fact that 50% of the compounds were degraded. This suggests that degradation of beta- and delta-HCH proceeds by a different pathway than that of alpha- and gamma-HCH.
authors.affiliation: Department of Zoology, University of Delhi, India.
authors.forename: Mrutyunjay
authors.initials: M
authors.lastname: Suar
authors.forename: Jan Roelof
authors.initials: JR
authors.lastname: van der Meer
authors.forename: Kirsten
authors.initials: K
authors.lastname: Lawlor
authors.forename: Christof
authors.initials: C
authors.lastname: Holliger
authors.forename: Rup
authors.initials: R
authors.lastname: Lal
mesh_terms: D001426:Bacterial Proteins / Q000235:genetics* / Q000378:metabolism; D001673:Biodegradation, Environmental; D003470:Culture Media; D015964:Gene Expression Regulation, Bacterial; D001556:Hexachlorocyclohexane / Q000737:chemistry* / Q000378:metabolism / Q000494:pharmacology*; D015151:Immunoblotting; D007536:Isomerism; D008190:Lyases / Q000235:genetics* / Q000378:metabolism; D009693:Nucleic Acid Hybridization; D020133:Reverse Transcriptase Polymerase Chain Reaction; D020578:Sphingomonas / Q000235:genetics / Q000254:growth & development / Q000378:metabolism*
chemical_list: D001426:Bacterial Proteins; D003470:Culture Media; C040534:alpha-hexachlorocyclohexane; C086916:delta-hexachlorocyclohexane; D001556:Hexachlorocyclohexane; D008190:Lyases; C071445:linA protein, Pseudomonas paucimobilis; C023888:beta-hexachlorocyclohexane