title: [Expression and promoter methylation of Apaf-1 gene in laryngeal squamous cell carcinoma].
abstract: Loss of tumor suppressor genes and apoptosis-associated genes was common event in laryngeal squamous cell carcinoma (LSCC). Apaf-1 (apoptotic protease activating factor-1) is a key factor in cytochrome C-dependent apoptotic pathway. To investigate the effect of Apaf-1 in progression of LSCC, we analyzed Apaf-1 from DNA and RNA levels. Semi-quantitative RT-PCR analysis of Apaf-1 mRNA showed that over 40 percent of LSCCs (11/27) were low expression compared to the para-neoplastic laryngeal tissues (PNTs). The results of CGH indicated loss in 2 of 18 cases but no amplification on chromosome 12q22-23. The LOH frequencies of D12S327, D12S1657, D12S393, D12S1706, D12S346 on 12q22-23 were 18.2%, 13.6%, 18.2%, 22.2% and 16.6%, respectively in 72 matched samples of LSCCs and PNTs. Methylation-specific PCR displayed that all of 11 LSCCs, whose expression of Apaf-1 mRNA down-regulated, were methylated in promoter regions. In contrast, only 1 of 16 LSCCs with no changes in Apaf-1 mRNA levels was methylated (chi2 test, P=0.0001). The results implied that abnormal expression of Apaf-1 participates in the genesis of LSCCs and decreased expression of Apaf-1 mRNA were not mainly due to the deletion of Apaf-1 gene. The Apaf-1 DNA methylation in promoter region might contribute to the decreased transcription of Apaf-1 in LSCCs.
authors.affiliation: Department of Medical Genetics, China Medical University, Shenyang 110001, China.
authors.forename: Dai-Fa
authors.initials: DF
authors.lastname: Huang
authors.forename: Wei-Neng
authors.initials: WN
authors.lastname: Fu
authors.forename: Chao
authors.initials: C
authors.lastname: Shang
authors.forename: Zhen-Ming
authors.initials: ZM
authors.lastname: Xu
authors.forename: Zeng-Gang
authors.initials: ZG
authors.lastname: Li
authors.forename: Kai-Lai
authors.initials: KL
authors.lastname: Sun
mesh_terms: D053477:Apoptotic Protease-Activating Factor 1; D002294:Carcinoma, Squamous Cell / Q000235:genetics*; D002881:Chromosomes, Human, Pair 12; D018899:CpG Islands; D019175:DNA Methylation; D006801:Humans; D007822:Laryngeal Neoplasms / Q000235:genetics*; D011401:Promoter Regions, Genetic; D011506:Proteins / Q000235:genetics*
chemical_list: C506592:APAF1 protein, human; D053477:Apoptotic Protease-Activating Factor 1; D011506:Proteins