Allosteric mechanisms in ACT domain containing enzymes involved in amino acid metabolism.
An important sequence motif identified by sequence analysis is shared by the ACT domain family, which has been found in a number of diverse proteins. Most of the proteins containing the ACT domain seem to be involved in amino acid and purine synthesis and are in many cases allosteric enzymes with complex regulation enforced by the binding of ligands. Here we explore the current understanding of the ACT domain function including its role as an allosteric module in a selected group of enzymes. We will further describe in more detail three of the proteins where some understanding is available on function and structure: i) the archetypical ACT domain protein E. coli 3PGDH, which catalyzes the first step in the biosynthesis of L-Ser, ii) the bifunctional chorismate mutase/prephenate dehydratase (P-protein) from E. coli, which catalyzes the first two steps in the biosynthesis of L-Phe, and iii) the mammalian aromatic amino acid hydroxylases, with special emphasis on phenylalanine hydroxylase, which catalyzes the first step in the catabolic degradation of L-phenylalanine (L-Phe). The ACT domain is commonly involved in the binding of a small regulatory molecule, such as the amino acids L-Ser and L-Phe in the case of 3PGDH and P-protein, respectively. On the other hand, for PAH, and probably for other enzymes, this domain appears to have been incorporated as a handy, flexible small module with the potential to provide allosteric regulation via transmission of finely tuned conformational changes, not necessarily initiated by regulatory ligand binding at the domain itself.
Liberles
J S
JS
Department of Biomedicine, University of Bergen, Bergen 5009, Norway.
Thórólfsson
M
M
Martínez
A
A
D000494:Allosteric Regulation; D000495:Allosteric Site; D020816:Amino Acid Motifs; D000595:Amino Acid Sequence; D000596:Amino Acids / Q000378:metabolism*; D000818:Animals; D002237:Carbohydrate Dehydrogenases / Q000737:chemistry / Q000378:metabolism; D002826:Chorismate Mutase / Q000737:chemistry / Q000378:metabolism; D004798:Enzymes / Q000737:chemistry* / Q000378:metabolism*; D029968:Escherichia coli Proteins / Q000737:chemistry / Q000378:metabolism; D019143:Evolution, Molecular; D006899:Mixed Function Oxygenases / Q000737:chemistry / Q000378:metabolism; D008969:Molecular Sequence Data; D009097:Multienzyme Complexes / Q000737:chemistry / Q000378:metabolism; D050543:Phosphoglycerate Dehydrogenase; D011302:Prephenate Dehydratase / Q000737:chemistry / Q000378:metabolism; D017434:Protein Structure, Tertiary
D000596:Amino Acids; D004798:Enzymes; D029968:Escherichia coli Proteins; D009097:Multienzyme Complexes; C071216:P-protein, E coli; D006899:Mixed Function Oxygenases; D002237:Carbohydrate Dehydrogenases; D050543:Phosphoglycerate Dehydrogenase; D011302:Prephenate Dehydratase; D002826:Chorismate Mutase