title: Destabilization of tetranucleotide repeats in Haemophilus influenzae mutants lacking RnaseHI or the Klenow domain of PolI.
abstract: A feature of Haemophilus influenzae genomes is the presence of several loci containing tracts of six or more identical tetranucleotide repeat units. These repeat tracts are unstable and mediate high frequency, reversible alterations in the expression of surface antigens. This process, termed phase variation (PV), enables H.influenzae to rapidly adapt to fluctuations in the host environment. Perturbation of lagging strand DNA synthesis is known to destabilize simple sequence repeats in yeast and Escherichia coli. By using a chromosomally located reporter construct, we demonstrated that the mutation of an H.influenzae rnhA (encoding RnaseHI) homologue increases the mutation rates of tetranucleotide repeats approximately 3-fold. Additionally, deletion of the Klenow domain of DNA polymerase I (PolI) resulted in a approximately 35-fold increase in tetranucleotide repeat-mediated PV rates. Deletion of the PolI 5'>3' exonuclease domain appears to be lethal. The phenotypes of these mutants suggest that delayed or mutagenic Okazaki fragment processing destabilizes H.influenzae tetranucleotide repeat tracts.
authors.affiliation: Molecular Infectious Diseases Group, Department of Paediatrics, Weatherall Institute for Molecular Medicine, University of Oxford, John Radcliffe Hospital Headington, Oxford OX3 9DU, UK. cbayliss@hammer.imm.ox.ac.uk
authors.forename: Christopher D
authors.initials: CD
authors.lastname: Bayliss
authors.forename: Wendy A
authors.initials: WA
authors.lastname: Sweetman
authors.forename: E Richard
authors.initials: ER
authors.lastname: Moxon
mesh_terms: D049109:Cell Proliferation; D004256:DNA Polymerase I / Q000737:chemistry / Q000235:genetics*; D005804:Genes, Lethal; D006193:Haemophilus influenzae / Q000166:cytology / Q000235:genetics*; D018895:Microsatellite Repeats; D009154:Mutation; D017434:Protein Structure, Tertiary; D016914:Ribonuclease H / Q000235:genetics*; D017384:Sequence Deletion
chemical_list: D004256:DNA Polymerase I; D016914:Ribonuclease H; C078856:ribonuclease HI